File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/ba6d8b627ec7fd6ed4b2c593e68951/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mth6182c because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:59:31,351 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:59:32,233 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:59:32,403 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:59:33,418 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:59:33,584 - cnv_pipe.batch.run_model - INFO - Processing cluster 724 with 174 probes
2026-06-04 16:59:33,990 - cnv_pipe.batch.run_model.cluster724 - INFO - Child process started for cluster 724 with 174 probes
2026-06-04 17:00:27,004 - cnv_pipe.batch.run_model.cluster724 - INFO - Child process finished cluster 724. Wrote cluster_724_samples.csv and cluster_724_params.csv
2026-06-04 17:00:27,005 - cnv_pipe.batch.run_model - INFO - Cluster 724 finished in 53.42 seconds. Status: SUCCESS