Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/4d622e2956850ec5a5d0d4cf8bef58/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/39f93bca1bc684732b054c91f826e6/positive_somatic_control_1.strelka.somatic_indels.vcf.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/4d622e2956850ec5a5d0d4cf8bef58/.command.run ==> STAGING COMPLETE (4 inputs) Lines total/split/joined/realigned/mismatch_removed/dup_removed/skipped: 67/0/0/0/0/0/0