File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/67/237e7772a473ba9c0258f720ecdf54/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jwk_cgs6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:57:51,931 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:57:52,798 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:57:52,970 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:57:54,075 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:57:54,147 - cnv_pipe.batch.run_model - INFO - Processing cluster 312 with 186 probes
2026-06-04 16:57:54,522 - cnv_pipe.batch.run_model.cluster312 - INFO - Child process started for cluster 312 with 186 probes
2026-06-04 16:58:52,195 - cnv_pipe.batch.run_model.cluster312 - INFO - Child process finished cluster 312. Wrote cluster_312_samples.csv and cluster_312_params.csv
2026-06-04 16:58:52,196 - cnv_pipe.batch.run_model - INFO - Cluster 312 finished in 58.05 seconds. Status: SUCCESS