mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nqufc8e1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:57:02,691 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:57:03,585 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:57:03,759 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:57:04,722 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:57:04,902 - cnv_pipe.batch.run_model - INFO - Processing cluster 58 with 196 probes
2026-06-04 16:57:05,279 - cnv_pipe.batch.run_model.cluster58 - INFO - Child process started for cluster 58 with 196 probes
2026-06-04 16:58:06,787 - cnv_pipe.batch.run_model.cluster58 - INFO - Child process finished cluster 58. Wrote cluster_58_samples.csv and cluster_58_params.csv
2026-06-04 16:58:06,788 - cnv_pipe.batch.run_model - INFO - Cluster 58 finished in 61.89 seconds. Status: SUCCESS