mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3kl69tj5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:57:01,370 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:57:02,208 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:57:02,384 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:57:03,550 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:57:03,620 - cnv_pipe.batch.run_model - INFO - Processing cluster 12 with 199 probes
2026-06-04 16:57:04,003 - cnv_pipe.batch.run_model.cluster12 - INFO - Child process started for cluster 12 with 199 probes
2026-06-04 16:58:06,082 - cnv_pipe.batch.run_model.cluster12 - INFO - Child process finished cluster 12. Wrote cluster_12_samples.csv and cluster_12_params.csv
2026-06-04 16:58:06,084 - cnv_pipe.batch.run_model - INFO - Cluster 12 finished in 62.46 seconds. Status: SUCCESS