[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXAe9MXu/chr20_14085521-14085828.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXAe9MXu/chr20_14085521-14085828.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXAe9MXu/chr20_14085521-14085828.bed.gz.tbi
[2026-06-04T16:54:14.150178Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T16:54:14.150869Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T16:54:14.150884Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T16:54:14.150891Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T16:54:14.150898Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXAe9MXu'
[2026-06-04T16:54:14.150903Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T16:54:14.150911Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T16:54:14.150916Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T16:54:14.150920Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-04T16:54:14.150924Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T16:54:14.150928Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T16:54:14.150931Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T16:54:14.150935Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T16:54:14.150938Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T16:54:14.152299Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T16:54:14.152446Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T16:54:14.158644Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T16:54:14.159581Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T16:54:14.159753Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T16:54:14.160278Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T16:54:14.160634Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.161130Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.161230Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.161320Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.161451Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.161523Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.161658Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.161785Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.162149Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.162639Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.162762Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.163123Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.163587Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.164682Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.165050Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.167650Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.167995Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T16:54:14.168116Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.168663Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.168929Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.169145Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.169215Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.169327Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.169395Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.169507Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.169575Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.169695Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.169760Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.169871Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.170013Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.170238Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.170677Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.170803Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.170867Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.170979Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.171046Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.171162Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.171226Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.171336Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.171405Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.171518Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.171580Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.171875Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.172268Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.172385Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.172453Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.172617Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.172737Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.172895Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.172963Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.173073Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.173138Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.173248Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.173513Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.174000Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.174074Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.174191Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.174263Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.174376Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.174440Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.174551Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.174612Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.174726Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.175266Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.175403Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.175821Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.176483Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.176562Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.177114Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.177183Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.177291Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.177353Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.177465Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.177614Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.179495Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.180104Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.180794Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.180868Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.180980Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.181047Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.181160Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.181222Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.181345Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.181406Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.181518Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.181592Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.181702Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.181773Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.181886Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.181970Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.182564Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.183140Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.183253Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.183318Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.183437Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.183499Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.184323Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.184521Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.201339Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.201837Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.201912Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.202212Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.202289Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.202399Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.202478Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.202623Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.202699Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:14.202758Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T16:54:14.211026Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.211853Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.212229Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.212585Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.213398Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.214454Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.214993Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.215658Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.217302Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.222776Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T16:54:14.230201Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T16:54:14.236688Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-04T16:54:14.238359Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-04T16:54:14.242467Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-04T16:54:14.244821Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-04T16:54:14.326175Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-04T16:54:14.326605Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-04T16:54:14.337453Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.337565Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.337611Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.338656Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.339181Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.339573Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.346773Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T16:54:14.349652Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-04T16:54:14.349971Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-04T16:54:14.455349Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.456696Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.460718Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-04T16:54:14.722207Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.723710Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.727902Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-04T16:54:14.788657Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.789991Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.793966Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-04T16:54:15.507271Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.508471Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.509250Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.509905Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.514611Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-04T16:54:15.516119Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-04T16:54:15.575495Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.577013Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.580460Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-04T16:54:15.641383Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.642734Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.647082Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T16:54:15.675789Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.677313Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.681815Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-04T16:54:15.709924Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.710946Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.714362Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T16:54:15.775436Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.776868Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.780423Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T16:54:15.809198Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.810496Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.813564Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T16:54:15.814446Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.815647Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.818961Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T16:54:15.847975Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.849261Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.852654Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T16:54:15.881760Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.882992Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.886440Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-04T16:54:15.915066Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.916484Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.918845Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.920078Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T16:54:15.920201Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.922957Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T16:54:15.952293Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.952388Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.953225Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.953578Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.958160Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-04T16:54:15.959167Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T16:54:16.018982Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.019904Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.022980Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-04T16:54:16.084385Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.085335Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.088506Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T16:54:16.150114Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.151087Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.154237Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-04T16:54:16.416448Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.417437Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.420795Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-04T16:54:16.933795Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.934735Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.938701Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-04T16:54:17.100313Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.100433Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.101680Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.102433Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.105986Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.107866Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T16:54:17.109487Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.112314Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-04T16:54:17.163921Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T16:54:17.173700Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.173811Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.173842Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.173867Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.175044Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.175495Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.175912Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.178381Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.179516Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T16:54:17.183569Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T16:54:17.183906Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-04T16:54:17.184690Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T16:54:17.243971Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.244080Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.244123Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.244162Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.245297Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.245755Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.246269Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.246664Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.252231Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-04T16:54:17.254552Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-04T16:54:17.257554Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-04T16:54:17.258557Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T16:54:17.314347Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.314489Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.315661Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.316121Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.320109Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-04T16:54:17.321974Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-04T16:54:17.324722Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.325849Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.328729Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T16:54:17.358074Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.359267Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.362167Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.363190Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-04T16:54:17.363725Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.367054Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-04T16:54:17.979575Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.979685Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.980537Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.980942Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.984511Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T16:54:17.985748Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-04T16:54:18.045630Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.045735Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.046619Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.046970Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.051789Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-04T16:54:18.462851Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.463745Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.467108Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-04T16:54:18.528095Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.528235Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.529017Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.529422Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.533764Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T16:54:18.534825Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-04T16:54:18.695419Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.696439Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.699838Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-04T16:54:19.112608Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.113464Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.117160Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T16:54:19.178047Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.178824Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.182728Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.183117Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-04T16:54:19.183964Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.188250Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T16:54:19.216303Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.217127Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.220809Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T16:54:19.249550Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.250720Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.251026Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.253327Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.255482Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-04T16:54:19.257100Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T16:54:19.286442Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.287255Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.290819Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-04T16:54:19.303609Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.304350Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.307982Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-04T16:54:19.336632Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.337428Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.341047Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-04T16:54:19.703122Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.703915Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.708336Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T16:54:20.170177Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.170906Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.174111Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-04T16:54:20.937304Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.938207Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.942291Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T16:54:21.003175Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.003261Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.004055Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.004818Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.009113Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-04T16:54:21.009879Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-04T16:54:21.069400Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.070271Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.073482Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-04T16:54:21.134494Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.134585Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.135298Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.135748Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.139920Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-04T16:54:21.140932Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-04T16:54:21.200791Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.200902Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.201663Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.201983Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.206356Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T16:54:21.207109Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-04T16:54:21.267499Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.267588Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.268166Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.269140Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.273651Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-04T16:54:21.274463Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-04T16:54:21.334562Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.335163Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.338280Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T16:54:21.399601Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.400213Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.402972Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T16:54:21.432330Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.432881Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.435456Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-04T16:54:21.465047Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.465599Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.468451Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-04T16:54:21.497810Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.498328Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.501424Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T16:54:21.563000Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.563533Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.566540Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T16:54:21.627631Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.628203Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.631253Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T16:54:21.692671Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.693194Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.695763Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-04T16:54:21.725232Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.725760Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.728691Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T16:54:21.757936Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.758454Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.761074Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-04T16:54:21.822794Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.823431Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.826731Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-04T16:54:21.887510Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.903433Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.904000Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.907559Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-04T16:54:21.968238Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.132647Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.133122Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.136852Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-04T16:54:22.197329Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.311634Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.312244Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.315213Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-04T16:54:22.376578Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.491017Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.491480Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.494237Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-04T16:54:22.555625Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.820448Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.820929Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.823639Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-04T16:54:22.853067Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.167448Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-04T16:54:27.178199Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.178277Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.178753Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.179577Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.182927Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-04T16:54:27.184355Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-04T16:54:27.245460Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.245533Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.245765Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.245896Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.246444Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.247433Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.250864Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T16:54:27.252439Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T16:54:27.253848Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T16:54:27.279926Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.280001Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.280221Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.280579Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.283841Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T16:54:27.284335Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.284592Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T16:54:27.316193Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.316262Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.316438Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:27.319108Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T16:54:27.348557Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:33.115254Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T16:54:47.271008Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T16:54:47.271008Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] 
[2026-06-04T16:54:47.271008Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T16:54:47.271111Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] 
[2026-06-04T16:54:47.271122Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T16:54:47.271129Z] [nf-fcaa94c540b42256334c72eab44e12d7-2c9a6-mc26l] [669_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec