mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-chflkepf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:59:28,041 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:59:29,337 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:59:29,627 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:59:31,447 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:59:31,703 - cnv_pipe.batch.run_model - INFO - Processing cluster 683 with 179 probes
2026-06-04 16:59:32,309 - cnv_pipe.batch.run_model.cluster683 - INFO - Child process started for cluster 683 with 179 probes
2026-06-04 17:01:03,083 - cnv_pipe.batch.run_model.cluster683 - INFO - Child process finished cluster 683. Wrote cluster_683_samples.csv and cluster_683_params.csv
2026-06-04 17:01:03,087 - cnv_pipe.batch.run_model - INFO - Cluster 683 finished in 91.38 seconds. Status: SUCCESS