File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/33c5ef75dcaff967da34e9bfa703a4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ji26_iyx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:00:18,635 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:00:19,543 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:00:19,717 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:00:20,842 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:00:20,913 - cnv_pipe.batch.run_model - INFO - Processing cluster 1006 with 192 probes
2026-06-04 17:00:21,293 - cnv_pipe.batch.run_model.cluster1006 - INFO - Child process started for cluster 1006 with 192 probes
2026-06-04 17:01:21,838 - cnv_pipe.batch.run_model.cluster1006 - INFO - Child process finished cluster 1006. Wrote cluster_1006_samples.csv and cluster_1006_params.csv
2026-06-04 17:01:21,840 - cnv_pipe.batch.run_model - INFO - Cluster 1006 finished in 60.93 seconds. Status: SUCCESS