[2026-06-04T16:54:12.232531Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T16:54:12.233277Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T16:54:12.233310Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T16:54:12.233317Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T16:54:12.233324Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXfNpYvY'
[2026-06-04T16:54:12.233328Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T16:54:12.233335Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T16:54:12.233339Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T16:54:12.233344Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-04T16:54:12.233349Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T16:54:12.233353Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T16:54:12.233358Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T16:54:12.233362Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T16:54:12.233366Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T16:54:12.234422Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T16:54:12.234630Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T16:54:12.241239Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T16:54:12.242428Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T16:54:12.242718Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T16:54:12.242966Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T16:54:12.243330Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.243915Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.244015Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.244091Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.244791Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.245688Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.246249Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.246462Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.246688Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.247584Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.248117Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.248531Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.251093Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.251671Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T16:54:12.252532Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.252633Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.252765Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.252838Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.252955Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.253019Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.253266Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.253675Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.255179Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.255305Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.255440Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.255510Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.255643Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.255715Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.255848Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.256644Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.257337Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.257692Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.257827Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.257894Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.258025Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.258097Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.258216Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.258285Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.258405Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.258469Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.258582Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.258645Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.258802Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.259243Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.259817Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.259909Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.260042Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.260113Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.260353Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.260428Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.260545Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.260612Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.261098Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.261494Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.261656Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.261728Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.261845Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.261970Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.262081Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.262146Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.262264Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.262326Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.262456Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.262521Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.262726Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.262984Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.263668Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.263734Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.263850Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.263922Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.264038Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.264155Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.264439Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.264518Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.266702Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.267291Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.267528Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.267604Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.267724Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.267791Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.267906Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.267971Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.268088Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.268165Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.268319Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.268650Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.269560Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.269676Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.269803Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.269874Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.270002Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.270071Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.270184Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.270249Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.270498Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.271390Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.288185Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.291126Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.291916Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.292248Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.292410Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.293038Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.293506Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.294210Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.294678Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.295367Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.295617Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.296614Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.296917Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.298123Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.301218Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.302073Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-06-04T16:54:12.302692Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.302882Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T16:54:12.303476Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T16:54:12.304420Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.309043Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T16:54:12.313915Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T16:54:12.320379Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T16:54:12.321144Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T16:54:12.325911Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-06-04T16:54:12.330800Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T16:54:12.795288Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.796672Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:12.800782Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T16:54:13.463612Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.464909Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.469458Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-06-04T16:54:13.630730Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.631963Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.636254Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T16:54:13.640625Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.641735Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:13.645616Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T16:54:14.107835Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.109070Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.112972Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T16:54:14.133637Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-06-04T16:54:14.141876Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.143038Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.147202Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-06-04T16:54:14.208379Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.208478Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.209628Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.210250Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.215675Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-06-04T16:54:14.216977Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T16:54:14.377328Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.378579Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.382680Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T16:54:14.895708Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.896919Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:14.901260Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T16:54:15.012377Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.013796Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.017408Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T16:54:15.279457Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.280758Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.284557Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-06-04T16:54:15.345682Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.345798Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.346957Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.347493Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.351269Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-06-04T16:54:15.352642Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T16:54:15.412371Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.412489Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.413545Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.413907Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.418952Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T16:54:15.419693Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T16:54:15.479999Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.481228Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.485436Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-06-04T16:54:15.489864Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.490809Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.494229Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-06-04T16:54:15.605454Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.606569Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.610548Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-06-04T16:54:15.822206Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.823416Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.827507Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T16:54:15.888627Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.889782Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.893513Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T16:54:15.922316Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.923533Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.927140Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T16:54:15.956131Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.957314Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:15.961180Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T16:54:16.423897Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.425328Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.429613Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T16:54:16.490488Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.491586Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.495924Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T16:54:16.556344Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.557411Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.561761Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T16:54:16.772972Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.774159Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.778777Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T16:54:16.839694Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.840885Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.845363Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-06-04T16:54:16.905844Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.907064Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:16.911470Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T16:54:17.022530Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.023666Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.027550Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T16:54:17.088646Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.089752Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.093161Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T16:54:17.106011Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.107051Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.110258Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T16:54:17.139563Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.140607Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.144468Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-06-04T16:54:17.149104Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.150054Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.153576Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T16:54:17.182914Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.183964Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.187659Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T16:54:17.188341Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.189033Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.192825Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-06-04T16:54:17.253300Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.254356Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.258313Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T16:54:17.319294Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.320332Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.323911Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-06-04T16:54:17.384999Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.386052Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.389842Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T16:54:17.450884Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.451903Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.455583Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T16:54:17.817502Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.818408Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.821892Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-06-04T16:54:17.882801Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.882899Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.882941Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.883896Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.884490Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.885151Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.890169Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T16:54:17.891927Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-06-04T16:54:17.893149Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T16:54:17.918752Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.919691Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.923051Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T16:54:17.923552Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.924223Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.927373Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T16:54:17.988461Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.988548Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.988581Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.989397Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.989875Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.990322Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:17.994384Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-06-04T16:54:17.997048Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-06-04T16:54:18.056326Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.057302Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.060974Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T16:54:18.122043Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.122982Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.126728Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-06-04T16:54:18.187735Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.188708Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.192312Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T16:54:18.253654Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.254689Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.258445Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T16:54:18.319387Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.320331Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.323706Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T16:54:18.385293Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.386231Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.390144Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-06-04T16:54:18.551542Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.552481Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.556837Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T16:54:18.617051Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.617148Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.617930Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.618355Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.622292Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-06-04T16:54:18.623742Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T16:54:18.683146Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.683254Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.684030Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.684651Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.689083Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T16:54:18.709414Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-06-04T16:54:18.718835Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.719605Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.722809Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T16:54:18.784103Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.784985Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.788479Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T16:54:18.848638Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T16:54:18.849241Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.849321Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.849986Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.850345Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.853501Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T16:54:18.888436Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-06-04T16:54:18.914681Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.914767Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.915414Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.915788Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:18.919961Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T16:54:19.230844Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.231557Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.235624Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-06-04T16:54:19.597052Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.597821Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.601549Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-06-04T16:54:19.614093Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.614774Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.617820Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T16:54:19.679105Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.679740Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.682819Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-06-04T16:54:19.744123Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.744933Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.748290Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T16:54:19.809288Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.809893Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:19.813332Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T16:54:20.074794Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.074884Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.075495Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.076024Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.079321Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-06-04T16:54:20.080384Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-06-04T16:54:20.092201Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.092763Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.095801Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T16:54:20.125057Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.125175Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.125203Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.125674Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.126063Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.127776Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.128727Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T16:54:20.131424Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T16:54:20.132546Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T16:54:20.160708Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.161215Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.164802Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.165199Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-06-04T16:54:20.165549Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.168433Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-06-04T16:54:20.197671Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.197744Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.198193Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.201443Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T16:54:20.230348Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.344667Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.345122Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.348401Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T16:54:20.378473Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.442808Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.443237Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.446438Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-06-04T16:54:20.507235Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.820797Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T16:54:20.821757Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.821823Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.821848Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.822239Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.822577Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.822950Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.826705Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T16:54:20.828048Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T16:54:20.828843Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T16:54:20.888130Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.888217Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.888240Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.888258Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.888646Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.892131Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T16:54:20.952671Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.952950Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.953066Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.953386Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.953662Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.958593Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T16:54:20.960362Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T16:54:20.961622Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T16:54:20.985586Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.985811Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.988674Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T16:54:20.989498Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.989534Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.989685Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T16:54:20.992112Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T16:54:21.021646Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.021725Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.021895Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T16:54:21.024340Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T16:54:21.053790Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T16:54:22.872334Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T16:54:31.122560Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T16:54:31.122560Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] 
[2026-06-04T16:54:31.122560Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T16:54:31.122664Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] 
[2026-06-04T16:54:31.122673Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T16:54:31.122683Z] [nf-f048aec8acf21faefec642710cf69ebd-a3412-clwh8] [676_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec