File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/13f00e7b2c1678288abab152431dc2/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8t63wblb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:00:01,451 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:00:02,281 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:00:02,469 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:00:03,411 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:00:03,586 - cnv_pipe.batch.run_model - INFO - Processing cluster 761 with 130 probes
2026-06-04 17:00:03,966 - cnv_pipe.batch.run_model.cluster761 - INFO - Child process started for cluster 761 with 130 probes
2026-06-04 17:00:46,494 - cnv_pipe.batch.run_model.cluster761 - INFO - Child process finished cluster 761. Wrote cluster_761_samples.csv and cluster_761_params.csv
2026-06-04 17:00:46,495 - cnv_pipe.batch.run_model - INFO - Cluster 761 finished in 42.91 seconds. Status: SUCCESS