File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/2a8ab03d467a24172cb666db7c8bee/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_d42ibmj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:00:27,869 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:00:28,679 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:00:28,847 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:00:29,789 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:00:29,865 - cnv_pipe.batch.run_model - INFO - Processing cluster 1189 with 195 probes
2026-06-04 17:00:30,325 - cnv_pipe.batch.run_model.cluster1189 - INFO - Child process started for cluster 1189 with 195 probes
2026-06-04 17:01:26,557 - cnv_pipe.batch.run_model.cluster1189 - INFO - Child process finished cluster 1189. Wrote cluster_1189_samples.csv and cluster_1189_params.csv
2026-06-04 17:01:26,558 - cnv_pipe.batch.run_model - INFO - Cluster 1189 finished in 56.69 seconds. Status: SUCCESS