mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jl5l7j5d because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:58:42,222 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:58:43,081 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:58:43,256 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:58:44,267 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:58:44,342 - cnv_pipe.batch.run_model - INFO - Processing cluster 610 with 157 probes
2026-06-04 16:58:44,821 - cnv_pipe.batch.run_model.cluster610 - INFO - Child process started for cluster 610 with 157 probes
2026-06-04 16:59:34,857 - cnv_pipe.batch.run_model.cluster610 - INFO - Child process finished cluster 610. Wrote cluster_610_samples.csv and cluster_610_params.csv
2026-06-04 16:59:34,858 - cnv_pipe.batch.run_model - INFO - Cluster 610 finished in 50.52 seconds. Status: SUCCESS