Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/22c52854e5ad5059aeb1cb590e1b74/negative_somatic_control_2.snv_indel.phased.vep.vcf.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/f1dfb348e3164e857610dd8d85ec5f/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f1/f1dfb348e3164e857610dd8d85ec5f/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/hotspots/hotspot_definitions.tsv
==> STAGING COMPLETE (4 inputs)
Loaded 73 hotspot definitions
Processed 171 variants, labeled 0 as HOTSPOT