File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/1d4aa01199d41ba4882d3a4b54a75e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-h5t33vbr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:59:33,813 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:59:34,629 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:59:34,793 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:59:35,950 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:59:36,018 - cnv_pipe.batch.run_model - INFO - Processing cluster 903 with 189 probes
2026-06-04 16:59:36,399 - cnv_pipe.batch.run_model.cluster903 - INFO - Child process started for cluster 903 with 189 probes
2026-06-04 17:00:34,361 - cnv_pipe.batch.run_model.cluster903 - INFO - Child process finished cluster 903. Wrote cluster_903_samples.csv and cluster_903_params.csv
2026-06-04 17:00:34,362 - cnv_pipe.batch.run_model - INFO - Cluster 903 finished in 58.34 seconds. Status: SUCCESS