File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/3bc46ee2af2917cd2292338d7f44a6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-g2osoqz8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:00:23,512 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:00:24,291 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:00:24,452 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:00:25,285 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:00:25,349 - cnv_pipe.batch.run_model - INFO - Processing cluster 1171 with 189 probes
2026-06-04 17:00:25,793 - cnv_pipe.batch.run_model.cluster1171 - INFO - Child process started for cluster 1171 with 189 probes
2026-06-04 17:01:17,884 - cnv_pipe.batch.run_model.cluster1171 - INFO - Child process finished cluster 1171. Wrote cluster_1171_samples.csv and cluster_1171_params.csv
2026-06-04 17:01:17,885 - cnv_pipe.batch.run_model - INFO - Cluster 1171 finished in 52.54 seconds. Status: SUCCESS