File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/67556bb29d7b895b53e40cb04c32e3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-52rkkjpl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:01:04,457 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:01:05,265 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:01:05,427 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:01:06,460 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:01:06,617 - cnv_pipe.batch.run_model - INFO - Processing cluster 1347 with 192 probes
2026-06-04 17:01:06,984 - cnv_pipe.batch.run_model.cluster1347 - INFO - Child process started for cluster 1347 with 192 probes
2026-06-04 17:02:01,145 - cnv_pipe.batch.run_model.cluster1347 - INFO - Child process finished cluster 1347. Wrote cluster_1347_samples.csv and cluster_1347_params.csv
2026-06-04 17:02:01,146 - cnv_pipe.batch.run_model - INFO - Cluster 1347 finished in 54.53 seconds. Status: SUCCESS