File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/ac1ab517322f1d72f7dbea82e9571c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8cmsq7zy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 16:59:36,443 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 16:59:37,401 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 16:59:37,592 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 16:59:38,645 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 16:59:38,807 - cnv_pipe.batch.run_model - INFO - Processing cluster 912 with 170 probes
2026-06-04 16:59:39,179 - cnv_pipe.batch.run_model.cluster912 - INFO - Child process started for cluster 912 with 170 probes
2026-06-04 17:00:30,221 - cnv_pipe.batch.run_model.cluster912 - INFO - Child process finished cluster 912. Wrote cluster_912_samples.csv and cluster_912_params.csv
2026-06-04 17:00:30,223 - cnv_pipe.batch.run_model - INFO - Cluster 912 finished in 51.42 seconds. Status: SUCCESS