File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/983b75028118f050fa998d6891a3f6/.command.log
Size
89.4 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr12_102480219-102480663.bed)
Attempt

Content

View in new tab 
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/325d3e9b29b733250425253fa97fc7/HCC1395_tumor.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/983b75028118f050fa998d6891a3f6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/325d3e9b29b733250425253fa97fc7/HCC1395_tumor.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/983b75028118f050fa998d6891a3f6/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz.tbi
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-04T17:03:34.095730Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T17:03:34.096469Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T17:03:34.096484Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T17:03:34.096489Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T17:03:34.096495Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXS3rgob'
[2026-06-04T17:03:34.096499Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T17:03:34.096506Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T17:03:34.096510Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T17:03:34.096515Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] [RunParameters] memMb: 761556
[2026-06-04T17:03:34.096519Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T17:03:34.096524Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T17:03:34.096528Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T17:03:34.096532Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T17:03:34.096536Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T17:03:34.097201Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T17:03:34.097349Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T17:03:34.103751Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T17:03:34.104630Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T17:03:34.104936Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T17:03:34.105216Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T17:03:34.105539Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.106300Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.106397Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.106473Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.106588Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.106867Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.107324Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.107505Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.107676Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.107970Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.108446Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.109145Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.109368Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.111437Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.111726Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T17:03:34.112021Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.112281Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.112563Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.112680Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.112743Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.113020Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.113094Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.113207Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.113275Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.113392Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.113455Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.113629Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.113897Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.114281Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.114366Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.114488Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.114566Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.114676Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.114737Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.114844Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.114908Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.115016Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.115079Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.115191Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.115433Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.115800Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.115863Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.115975Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.116039Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.116145Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.116209Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.116319Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.116435Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.116594Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.116673Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.116873Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.117321Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.117437Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.117497Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.117634Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.117695Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.117803Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.117880Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.117987Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.118053Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.118163Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.118224Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.118358Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.118728Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.119227Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.119299Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.119409Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.119471Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.119576Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.119641Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.119746Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.119812Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.119921Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.119983Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.121756Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.122591Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.122724Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.122794Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.122906Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.122971Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.123085Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.123147Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.123259Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.123322Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.123430Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.123500Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.123905Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.124599Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.124719Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.124783Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.124895Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.124972Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.125088Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.125151Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.125263Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.125334Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.125448Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.125510Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.143658Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.143913Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.144838Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.145096Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.145256Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.145610Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.145887Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.146468Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.146883Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.147541Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.148111Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.148416Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.149344Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.150399Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.150661Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.151189Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:03:34.152246Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T17:03:34.152682Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.153785Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.157667Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T17:03:34.161041Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T17:03:34.164406Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T17:03:34.167704Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T17:03:34.170929Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T17:03:34.174786Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T17:03:34.178624Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T17:03:34.241397Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.241483Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.242803Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.243108Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.243604Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.249572Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T17:03:34.250184Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.252862Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T17:03:34.255256Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T17:03:34.316595Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.316672Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.317932Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.318403Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.321767Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T17:03:34.324359Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T17:03:34.353492Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.354575Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.357313Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T17:03:34.386592Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.387613Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.391427Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T17:03:34.903581Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.905185Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:34.908508Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T17:03:35.471242Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:35.472488Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:35.476251Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T17:03:35.988464Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:35.988586Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:35.989888Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:35.990450Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:35.995205Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T17:03:36.006355Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.007401Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.010453Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T17:03:36.149785Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T17:03:36.172229Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.172338Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.173477Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.173890Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.178159Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T17:03:36.178643Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T17:03:36.238875Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.238974Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.240162Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.240636Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.244129Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T17:03:36.244890Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T17:03:36.305431Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.305551Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.306642Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.307198Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.310447Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T17:03:36.312084Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T17:03:36.371933Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.373077Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.376743Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T17:03:36.538083Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.539223Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.542894Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T17:03:36.703940Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.705260Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.708593Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T17:03:36.769733Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.770836Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.773916Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T17:03:36.835027Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.836024Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.839255Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T17:03:36.878290Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T17:03:36.900357Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.900446Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.900476Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.900497Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.901418Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.901773Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.902292Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.903088Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.907359Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T17:03:36.908094Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T17:03:36.911057Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T17:03:36.911791Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T17:03:36.972337Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.972415Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.972441Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.973366Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.973663Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.974212Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:36.977088Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T17:03:36.979559Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T17:03:36.981667Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T17:03:37.038993Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.040084Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.042209Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.043095Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.043575Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T17:03:37.046435Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T17:03:37.107520Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.108438Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.111941Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T17:03:37.674522Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.675528Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.678581Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T17:03:37.707579Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.709168Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.709543Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.710905Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.713561Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T17:03:37.714358Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T17:03:37.743652Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.744462Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.746323Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.747312Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.748881Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T17:03:37.750019Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T17:03:37.779287Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.780068Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.783029Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T17:03:37.784415Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.785080Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.787878Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T17:03:37.849412Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.850269Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.853368Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T17:03:37.914489Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.915234Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.918258Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T17:03:37.979365Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.980181Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:37.983171Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T17:03:38.044589Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.045471Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.048499Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T17:03:38.109652Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.110689Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.114040Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T17:03:38.118806Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.119544Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.122361Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T17:03:38.183567Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.184411Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.187510Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T17:03:38.248688Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.249477Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.252747Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T17:03:38.314119Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.314206Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.314232Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.315095Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.318276Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.318812Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.321255Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T17:03:38.324278Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T17:03:38.325229Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T17:03:38.385203Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.385278Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.385305Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.386002Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.386535Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.386929Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.392099Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T17:03:38.393469Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T17:03:38.395455Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T17:03:38.451494Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.452257Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.455055Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T17:03:38.516339Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.517127Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.520061Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T17:03:38.533205Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.533858Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.536561Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T17:03:38.599288Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.600197Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.603028Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T17:03:38.664487Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.665441Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.668290Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T17:03:38.697476Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.698491Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.701372Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T17:03:38.762593Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.762679Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.763550Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.763941Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.767116Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T17:03:38.768171Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T17:03:38.796435Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.796524Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.797358Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.797870Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.801112Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T17:03:38.802041Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T17:03:38.862156Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.862239Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.863024Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.863682Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.866866Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T17:03:38.868584Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T17:03:38.928385Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.928466Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.928506Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.929154Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.929443Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.929796Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.933606Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T17:03:38.935486Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T17:03:38.936397Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T17:03:38.994482Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.994541Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.994562Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.995080Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.995411Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.995890Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:38.999577Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T17:03:39.000824Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T17:03:39.012681Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.013265Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.015919Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T17:03:39.034715Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T17:03:39.045364Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.045420Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.045444Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.045463Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.045955Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.046390Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.046894Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.047805Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.051702Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T17:03:39.052355Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T17:03:39.054912Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T17:03:39.055574Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T17:03:39.083118Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.083188Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.083214Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.083696Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.084061Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.084554Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.087870Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T17:03:39.089582Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T17:03:39.090319Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T17:03:39.118155Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.118229Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.118686Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.119092Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.122290Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T17:03:39.123173Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T17:03:39.135302Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.135814Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.138320Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T17:03:39.167806Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.171605Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.285922Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.286462Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.289566Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T17:03:39.350646Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.916166Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.916746Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.920144Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T17:03:39.981207Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.245713Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.246264Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.249225Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T17:03:40.278363Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.294298Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.294796Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.297522Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T17:03:40.326968Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.391091Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.391628Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.395010Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T17:03:40.423799Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.488037Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.488542Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.491669Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T17:03:40.520939Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.521280Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.521415Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.521665Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.522013Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.526689Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T17:03:40.528235Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T17:03:40.529062Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T17:03:40.555627Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.555884Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.556099Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.556347Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.556797Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.559264Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T17:03:40.560287Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T17:03:40.588921Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.592288Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.592455Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.595534Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T17:03:40.624634Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.750040Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T17:03:52.985423Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T17:03:52.985423Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] 
[2026-06-04T17:03:52.985423Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T17:03:52.985530Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] 
[2026-06-04T17:03:52.985538Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T17:03:52.985547Z] [nf-dd983b75028118f050fa998d6891a3f6-d76f2-527rh] [600_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec