File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/eb/5ec88416e4b332304e4753ecbfc479/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-efeg9l9p because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:08:40,028 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:08:40,873 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:08:41,044 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:08:41,997 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:08:42,156 - cnv_pipe.batch.run_model - INFO - Processing cluster 1060 with 170 probes
2026-06-04 17:08:42,526 - cnv_pipe.batch.run_model.cluster1060 - INFO - Child process started for cluster 1060 with 170 probes
2026-06-04 17:09:32,772 - cnv_pipe.batch.run_model.cluster1060 - INFO - Child process finished cluster 1060. Wrote cluster_1060_samples.csv and cluster_1060_params.csv
2026-06-04 17:09:32,773 - cnv_pipe.batch.run_model - INFO - Cluster 1060 finished in 50.62 seconds. Status: SUCCESS