mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rlju1_oc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:05:19,943 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:05:20,767 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:05:20,933 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:05:21,842 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:05:21,992 - cnv_pipe.batch.run_model - INFO - Processing cluster 13 with 199 probes
2026-06-04 17:05:22,356 - cnv_pipe.batch.run_model.cluster13 - INFO - Child process started for cluster 13 with 199 probes
2026-06-04 17:06:19,958 - cnv_pipe.batch.run_model.cluster13 - INFO - Child process finished cluster 13. Wrote cluster_13_samples.csv and cluster_13_params.csv
2026-06-04 17:06:19,960 - cnv_pipe.batch.run_model - INFO - Cluster 13 finished in 57.97 seconds. Status: SUCCESS