mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oernyw_w because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:05:36,855 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:05:37,648 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:05:37,807 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:05:38,752 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:05:38,905 - cnv_pipe.batch.run_model - INFO - Processing cluster 106 with 195 probes
2026-06-04 17:05:39,273 - cnv_pipe.batch.run_model.cluster106 - INFO - Child process started for cluster 106 with 195 probes
2026-06-04 17:06:35,075 - cnv_pipe.batch.run_model.cluster106 - INFO - Child process finished cluster 106. Wrote cluster_106_samples.csv and cluster_106_params.csv
2026-06-04 17:06:35,076 - cnv_pipe.batch.run_model - INFO - Cluster 106 finished in 56.17 seconds. Status: SUCCESS