mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d3_5_gg1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:08:40,477 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:08:41,252 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:08:41,416 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:08:42,313 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:08:42,478 - cnv_pipe.batch.run_model - INFO - Processing cluster 1067 with 189 probes
2026-06-04 17:08:42,844 - cnv_pipe.batch.run_model.cluster1067 - INFO - Child process started for cluster 1067 with 189 probes
2026-06-04 17:09:35,807 - cnv_pipe.batch.run_model.cluster1067 - INFO - Child process finished cluster 1067. Wrote cluster_1067_samples.csv and cluster_1067_params.csv
2026-06-04 17:09:35,809 - cnv_pipe.batch.run_model - INFO - Cluster 1067 finished in 53.33 seconds. Status: SUCCESS