File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ff/f4a6f0be438c8dfa6f46dbb6f0ceb7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jhuevdmg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:08:07,944 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:08:08,730 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:08:08,888 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:08:09,912 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:08:10,048 - cnv_pipe.batch.run_model - INFO - Processing cluster 911 with 192 probes
2026-06-04 17:08:10,413 - cnv_pipe.batch.run_model.cluster911 - INFO - Child process started for cluster 911 with 192 probes
2026-06-04 17:09:04,266 - cnv_pipe.batch.run_model.cluster911 - INFO - Child process finished cluster 911. Wrote cluster_911_samples.csv and cluster_911_params.csv
2026-06-04 17:09:04,267 - cnv_pipe.batch.run_model - INFO - Cluster 911 finished in 54.22 seconds. Status: SUCCESS