File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/7fe2bf6b15ab7cdde4d8dd53ae51cb/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kzh4d460 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:07:39,229 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:07:40,092 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:07:40,276 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:07:41,265 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:07:41,338 - cnv_pipe.batch.run_model - INFO - Processing cluster 791 with 200 probes
2026-06-04 17:07:41,797 - cnv_pipe.batch.run_model.cluster791 - INFO - Child process started for cluster 791 with 200 probes
2026-06-04 17:08:40,702 - cnv_pipe.batch.run_model.cluster791 - INFO - Child process finished cluster 791. Wrote cluster_791_samples.csv and cluster_791_params.csv
2026-06-04 17:08:40,704 - cnv_pipe.batch.run_model - INFO - Cluster 791 finished in 59.37 seconds. Status: SUCCESS