File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4c/d7104a8afb3dff9440fb56411c4c0b/.command.err
Size
53.7 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr16_25246607-25247490.bed)
Attempt

Content

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[2026-06-04T17:03:46.989710Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T17:03:46.993183Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T17:03:46.993203Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T17:03:46.993209Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T17:03:46.993215Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXfNrMkG'
[2026-06-04T17:03:46.993219Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T17:03:46.993226Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T17:03:46.993230Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T17:03:46.993234Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] [RunParameters] memMb: 1547931
[2026-06-04T17:03:46.993238Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T17:03:46.993242Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T17:03:46.993246Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T17:03:46.993251Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T17:03:46.993255Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T17:03:46.994014Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T17:03:46.994068Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T17:03:47.000641Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T17:03:47.001174Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T17:03:47.001605Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T17:03:47.001923Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T17:03:47.002124Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.003164Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.003261Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.003336Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.003478Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.003704Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.004182Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.004330Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.004439Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.004569Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.004862Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.005137Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.005295Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.005486Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.006864Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.007213Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T17:03:47.007589Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.007691Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.007825Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.007894Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.008094Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.008168Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.008290Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.008357Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.008562Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.008869Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.008988Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.009052Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.009159Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.009224Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.009332Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.009406Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.009525Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.009589Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.009699Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.009763Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.009873Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.010346Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.010634Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.010699Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.010812Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.010873Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.010987Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.011056Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.011162Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.011224Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.011338Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.011400Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.011602Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.011716Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.012172Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.012237Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.012345Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.012410Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.012518Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.012579Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.025944Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.026380Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.026446Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.026594Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.026669Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.026750Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.026820Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.026924Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.026990Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:03:47.027043Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T17:03:47.031085Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.031575Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.031882Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.032244Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.034024Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.034536Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.034800Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T17:03:47.036410Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.036898Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0004] Task initiated on local node
[2026-06-04T17:03:47.037490Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.040484Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.040745Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0001] Task initiated on local node
[2026-06-04T17:03:47.044641Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0001] Task initiated on local node
[2026-06-04T17:03:47.048707Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0006] Task initiated on local node
[2026-06-04T17:03:47.049314Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T17:03:47.052509Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T17:03:47.053376Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0000] Task initiated on local node
[2026-06-04T17:03:47.106947Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.107627Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.111251Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0004] Task initiated on local node
[2026-06-04T17:03:47.873491Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.874208Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.876954Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0003] Task initiated on local node
[2026-06-04T17:03:47.938622Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.938681Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.939256Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.939739Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.941758Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0006] Task initiated on local node
[2026-06-04T17:03:47.943535Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T17:03:47.956867Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.957483Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.960539Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0002] Task initiated on local node
[2026-06-04T17:03:47.973956Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.974538Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.976776Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T17:03:48.006450Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.006974Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.009220Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0005] Task initiated on local node
[2026-06-04T17:03:48.171109Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.171689Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.174292Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0000] Task initiated on local node
[2026-06-04T17:03:48.204664Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.205683Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.208631Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0003] Task initiated on local node
[2026-06-04T17:03:48.269698Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.270325Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.273087Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0002] Task initiated on local node
[2026-06-04T17:03:48.334436Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.335038Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.337911Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0005] Task initiated on local node
[2026-06-04T17:03:48.449508Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.450155Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.452925Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T17:03:48.482204Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.483197Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.483668Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.485423Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.485908Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0001] Task initiated on local node
[2026-06-04T17:03:48.488193Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0004] Task initiated on local node
[2026-06-04T17:03:48.517649Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.517715Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.518205Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.518702Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.521576Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0004] Task initiated on local node
[2026-06-04T17:03:48.522593Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0004] Task initiated on local node
[2026-06-04T17:03:48.550832Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.551420Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.553864Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0003] Task initiated on local node
[2026-06-04T17:03:48.583548Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.584094Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.586559Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T17:03:48.616108Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.616599Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.619314Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0003] Task initiated on local node
[2026-06-04T17:03:48.632398Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.632906Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.635179Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T17:03:48.648863Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.649399Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.652032Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0000] Task initiated on local node
[2026-06-04T17:03:48.681529Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.682070Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.684669Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T17:03:48.746163Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.746649Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.749703Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0001] Task initiated on local node
[2026-06-04T17:03:48.778734Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.779243Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.782027Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0006] Task initiated on local node
[2026-06-04T17:03:48.795186Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.795696Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.797791Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.798406Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0005] Task initiated on local node
[2026-06-04T17:03:48.798494Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.801085Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T17:03:48.830443Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.830525Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.831002Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.833006Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.833605Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0000] Task initiated on local node
[2026-06-04T17:03:48.836007Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0002] Task initiated on local node
[2026-06-04T17:03:48.947535Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.948074Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.951175Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T17:03:48.980361Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.980849Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.983246Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T17:03:49.012793Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.013237Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.015445Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0002] Task initiated on local node
[2026-06-04T17:03:49.045196Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.045649Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.048090Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T17:03:49.077898Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.078341Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.080597Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0002] Task initiated on local node
[2026-06-04T17:03:49.110344Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.110400Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.110824Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.111390Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.114550Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0003] Task initiated on local node
[2026-06-04T17:03:49.115609Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0001] Task initiated on local node
[2026-06-04T17:03:49.728729Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.729301Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.731962Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0004] Task initiated on local node
[2026-06-04T17:03:49.761364Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.761819Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.764780Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T17:03:49.976540Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.977120Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.979747Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T17:03:50.009267Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.009688Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.012144Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T17:03:50.041744Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.042192Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.044403Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0005] Task initiated on local node
[2026-06-04T17:03:50.106413Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.220485Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.220978Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.223765Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0002] Task initiated on local node
[2026-06-04T17:03:50.253067Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.567522Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.568025Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.570613Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0001] Task initiated on local node
[2026-06-04T17:03:50.601325Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.601419Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.601815Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.603979Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0006] Task initiated on local node
[2026-06-04T17:03:50.633825Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.747753Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.748152Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.750632Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T17:03:50.781280Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.945319Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.945721Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.948414Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0000] Task initiated on local node
[2026-06-04T17:03:50.977695Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.292084Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.292472Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.295455Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0000] Task initiated on local node
[2026-06-04T17:03:51.324517Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.538602Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.538955Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.541650Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0003] Task initiated on local node
[2026-06-04T17:03:51.571132Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.571344Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.571458Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.571993Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.572523Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.575851Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T17:03:51.576730Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T17:03:51.599778Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T17:03:51.605199Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.605249Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.605267Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.605433Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.605769Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.608017Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T17:03:51.608641Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T17:03:51.638075Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.638129Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.638281Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.640489Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T17:03:51.671081Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.636643Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T17:03:57.559362Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T17:03:57.559362Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] 
[2026-06-04T17:03:57.559362Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T17:03:57.559421Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] 
[2026-06-04T17:03:57.559429Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T17:03:57.559435Z] [nf-4cd7104a8afb3dff9440fb56411c4c0b-304af-7n4xj] [594_1] [WorkflowRunner] Elapsed time for full workflow: 10 sec