cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:165000001, elapsed 0.0s, est remaining 0.7s, peak mem 114MB, user 0.1s, sys 0.7s, output queue size 3
progress 10% @chr2:77000001, elapsed 0.1s, est remaining 0.6s, peak mem 114MB, user 0.1s, sys 1.6s, output queue size 14
progress 15% @chr2:234000001, elapsed 0.1s, est remaining 0.6s, peak mem 114MB, user 0.3s, sys 2.5s, output queue size 24
progress 20% @chr3:152000001, elapsed 0.1s, est remaining 0.5s, peak mem 114MB, user 0.4s, sys 3.4s, output queue size 11
progress 25% @chr4:115000001, elapsed 0.2s, est remaining 0.5s, peak mem 114MB, user 0.5s, sys 4.3s, output queue size 5
progress 30% @chr5:84000001, elapsed 0.2s, est remaining 0.5s, peak mem 114MB, user 0.6s, sys 5.2s, output queue size 2
progress 35% @chr6:57000001, elapsed 0.2s, est remaining 0.4s, peak mem 114MB, user 0.6s, sys 6.1s, output queue size 15
progress 40% @chr7:56000001, elapsed 0.3s, est remaining 0.4s, peak mem 114MB, user 0.7s, sys 7.1s, output queue size 13
progress 45% @chr8:58000001, elapsed 0.3s, est remaining 0.4s, peak mem 114MB, user 0.7s, sys 8.0s, output queue size 5
progress 50% @chr9:75000001, elapsed 0.3s, est remaining 0.3s, peak mem 114MB, user 0.8s, sys 9.0s, output queue size 7
progress 55% @chr10:96000001, elapsed 0.4s, est remaining 0.3s, peak mem 114MB, user 0.8s, sys 9.9s, output queue size 4
progress 60% @chr11:121000001, elapsed 0.4s, est remaining 0.3s, peak mem 114MB, user 0.9s, sys 10.8s, output queue size 2
progress 65% @chr13:12000001, elapsed 0.4s, est remaining 0.2s, peak mem 114MB, user 1.0s, sys 11.7s, output queue size 3
progress 70% @chr14:62000001, elapsed 0.5s, est remaining 0.2s, peak mem 114MB, user 1.1s, sys 12.6s, output queue size 8
progress 75% @chr16:5000001, elapsed 0.5s, est remaining 0.2s, peak mem 114MB, user 1.1s, sys 13.5s, output queue size 8
progress 80% @chr18:1000001, elapsed 0.5s, est remaining 0.1s, peak mem 114MB, user 1.2s, sys 14.4s, output queue size 13
progress 85% @chr20:21000001, elapsed 0.6s, est remaining 0.1s, peak mem 114MB, user 1.2s, sys 15.3s, output queue size 11
progress 90% @chrX:39000001, elapsed 0.6s, est remaining 0.1s, peak mem 129MB, user 1.6s, sys 15.9s, output queue size 114
progress 95% @chrY:35000001, elapsed 0.6s, est remaining 0.0s, peak mem 144MB, user 2.1s, sys 16.6s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.2s, est remaining 0.0s, peak mem 165MB, user 3.6s, sys 17.6s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395363
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.318 user 8.775 sys 10.439 real
done: 1 calls 0.003 user 0.000 sys 0.011 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.001 user 0.010 sys 1.187 real
idle: 85 calls 0.008 user 0.021 sys 45.423 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 173154304 mem 4.003 user 18.480 sys 2.658 real