[2026-06-04T17:03:39.571421Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T17:03:39.572057Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T17:03:39.572071Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T17:03:39.572076Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T17:03:39.572080Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXgVf1aN'
[2026-06-04T17:03:39.572084Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T17:03:39.572089Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T17:03:39.572093Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T17:03:39.572096Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-04T17:03:39.572100Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T17:03:39.572104Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T17:03:39.572107Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T17:03:39.572111Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T17:03:39.572115Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T17:03:39.572855Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T17:03:39.572971Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T17:03:39.578689Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T17:03:39.579346Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T17:03:39.579625Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T17:03:39.579900Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T17:03:39.580191Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.580979Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.581072Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.581143Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.581387Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.581657Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.581915Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.582018Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.582421Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.583035Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.584109Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.584821Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.585145Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.585429Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T17:03:39.585701Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.585942Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.586064Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.586128Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.586241Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.586304Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.586488Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.586558Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.586670Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.586736Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.586849Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.587049Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.587369Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.587434Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.587563Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.587632Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.587747Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.587825Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.587937Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.588001Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.588108Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.588173Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.588282Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.588558Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.588915Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.588977Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.589099Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.589161Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.589272Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.589340Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.589446Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.589518Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.589660Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.589774Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.589998Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.590395Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.590510Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.590576Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.590684Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.590745Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.590853Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.590915Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.591028Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.591091Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.591197Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.591260Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.591370Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.591456Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.591749Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.592179Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.592289Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.592357Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.592464Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.592524Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.592631Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.592705Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.592811Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.592872Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.592985Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.593050Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.594373Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.594952Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.595076Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.595148Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.595261Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.595324Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.595435Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.595496Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.595657Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.595726Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.595838Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.595906Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.596184Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.596929Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.597577Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.597646Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.597759Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.597827Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.597935Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.597998Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.598135Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.598197Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.598312Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.598374Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.614601Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.615248Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.615462Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.615629Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.616654Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.616774Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.616873Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.617255Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.617780Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.617960Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.618855Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.619099Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.619475Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:03:39.619796Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T17:03:39.620234Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.622065Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.622562Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T17:03:39.623077Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.624226Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.625052Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.630278Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T17:03:39.632271Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T17:03:39.635485Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T17:03:39.638592Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T17:03:39.640046Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T17:03:39.643267Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T17:03:39.701910Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T17:03:39.706258Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.706327Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.706352Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.707228Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.707603Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.707949Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.713034Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T17:03:39.713480Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T17:03:39.713971Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T17:03:39.772601Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.773615Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.776414Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-04T17:03:39.805783Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.806723Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.809445Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T17:03:39.838701Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.839726Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:39.842307Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T17:03:40.305073Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.305166Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.306131Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.306624Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.309758Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-04T17:03:40.311010Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-04T17:03:40.340488Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.340558Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.341400Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.341881Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.344767Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T17:03:40.345832Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T17:03:40.406359Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.407299Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.410147Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T17:03:40.471362Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.471447Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.472353Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.473935Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.475673Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-04T17:03:40.476734Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T17:03:40.538551Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.538630Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.539560Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.540333Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.542942Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T17:03:40.543914Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T17:03:40.605826Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.606768Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.609312Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T17:03:41.071881Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.072846Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.075819Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T17:03:41.137319Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.138327Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.141289Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T17:03:41.302764Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.303774Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.306448Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-04T17:03:41.335727Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.337005Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.337322Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.338568Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.341382Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T17:03:41.342382Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T17:03:41.354648Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.355449Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.358005Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T17:03:41.387429Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.388281Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.390877Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-04T17:03:41.392003Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.392047Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.392693Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.393000Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.395618Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-04T17:03:41.396502Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T17:03:41.409063Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.409858Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.412305Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-04T17:03:41.425999Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.426068Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.426767Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.427204Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.429604Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-04T17:03:41.430539Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-04T17:03:41.443073Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.443867Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.446045Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-04T17:03:41.475864Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.475935Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.475962Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.476685Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.477100Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.477538Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.480971Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-04T17:03:41.482239Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-04T17:03:41.483231Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T17:03:41.511025Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.511098Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.511895Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.512511Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.515639Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-04T17:03:41.515852Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T17:03:41.545339Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.546129Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.548642Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-04T17:03:41.562161Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.562956Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.565747Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-04T17:03:41.595043Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.595122Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.595896Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.596184Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.598872Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-04T17:03:41.599876Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T17:03:41.628566Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.629369Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.632032Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T17:03:41.693654Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.694413Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.697215Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-04T17:03:41.726433Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.727209Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.729828Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T17:03:41.891730Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.892565Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.895337Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-04T17:03:41.924526Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.925287Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.928152Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T17:03:42.089814Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.090634Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.093696Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-04T17:03:42.122659Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.123408Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.126105Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-04T17:03:42.127031Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.127707Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.130570Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T17:03:42.159866Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.160612Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.163344Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T17:03:42.192496Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.193232Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.196136Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-04T17:03:42.225464Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.226224Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.229004Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T17:03:42.390545Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.391312Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.394385Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T17:03:42.756533Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.757329Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.760358Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T17:03:42.821494Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.822247Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.825207Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T17:03:42.936635Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.937420Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.940164Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T17:03:43.002136Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.002904Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.005694Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-04T17:03:43.067404Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.068212Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.070765Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-04T17:03:43.100138Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.100854Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.103343Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-04T17:03:43.132783Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.133483Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.136276Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T17:03:43.149981Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.150656Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.153393Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-04T17:03:43.158882Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.159508Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.161945Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-04T17:03:43.163316Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.163885Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.166433Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T17:03:43.196034Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.196121Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.196736Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.197023Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.199896Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-04T17:03:43.200728Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T17:03:43.229413Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.230485Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.230764Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.231685Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.234133Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T17:03:43.235219Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-04T17:03:43.264728Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.264805Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.265402Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.265811Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.268502Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-04T17:03:43.269458Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T17:03:43.299175Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.299252Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.299898Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.300186Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.302907Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-04T17:03:43.303706Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T17:03:43.332336Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.332974Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.335696Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T17:03:43.397071Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.397717Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.400269Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-04T17:03:43.429649Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.430285Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.432980Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T17:03:43.446177Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.446774Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.449649Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-04T17:03:43.478776Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.479380Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.482333Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T17:03:43.543697Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.544353Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.547042Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-04T17:03:43.608496Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.609129Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.611899Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-04T17:03:43.641112Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.641675Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.644195Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-04T17:03:43.673912Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.674486Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.676986Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-04T17:03:43.706446Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.707008Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.709658Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-04T17:03:43.739068Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.739661Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.742426Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T17:03:43.803911Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.804513Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.807254Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-04T17:03:43.868584Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.869185Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.872116Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-04T17:03:43.901080Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.901628Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.904126Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-04T17:03:43.933730Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.949718Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.950199Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.952555Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-04T17:03:43.982324Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.096768Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.097290Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.100154Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-04T17:03:44.129190Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.644530Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.644611Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.645061Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.645336Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.647954Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-04T17:03:44.648813Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-04T17:03:44.678606Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.678671Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.842790Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.843239Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.845739Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-04T17:03:44.875200Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.875267Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.875698Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.877884Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-04T17:03:44.907559Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.907620Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.908024Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.910037Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-04T17:03:44.939931Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.940197Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.940316Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.940571Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.940851Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.944689Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T17:03:44.945827Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T17:03:44.946886Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T17:03:44.973059Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.973117Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.973140Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.973327Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.973877Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.975955Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T17:03:44.976800Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T17:03:45.006599Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.006660Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.006833Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.009100Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T17:03:45.038837Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.253187Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T17:03:50.129192Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T17:03:50.129192Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] 
[2026-06-04T17:03:50.129192Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T17:03:50.129244Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] 
[2026-06-04T17:03:50.129250Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T17:03:50.129257Z] [nf-4cb9e57c536d9d31f1902ccb8c293827-451dd-448dc] [579_1] [WorkflowRunner] Elapsed time for full workflow: 10 sec