File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/b19bffc5e1b2d9e3cab125a9335500/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-g4s21n_c because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:07:57,817 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:07:58,644 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:07:58,811 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:07:59,825 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:07:59,896 - cnv_pipe.batch.run_model - INFO - Processing cluster 873 with 188 probes
2026-06-04 17:08:00,276 - cnv_pipe.batch.run_model.cluster873 - INFO - Child process started for cluster 873 with 188 probes
2026-06-04 17:08:56,355 - cnv_pipe.batch.run_model.cluster873 - INFO - Child process finished cluster 873. Wrote cluster_873_samples.csv and cluster_873_params.csv
2026-06-04 17:08:56,359 - cnv_pipe.batch.run_model - INFO - Cluster 873 finished in 56.46 seconds. Status: SUCCESS