File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/12cfeb33591835e5f2c1111669fabe/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-thori3g_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:08:43,607 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:08:44,444 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:08:44,622 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:08:45,534 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:08:45,692 - cnv_pipe.batch.run_model - INFO - Processing cluster 1081 with 183 probes
2026-06-04 17:08:46,067 - cnv_pipe.batch.run_model.cluster1081 - INFO - Child process started for cluster 1081 with 183 probes
2026-06-04 17:09:41,965 - cnv_pipe.batch.run_model.cluster1081 - INFO - Child process finished cluster 1081. Wrote cluster_1081_samples.csv and cluster_1081_params.csv
2026-06-04 17:09:41,966 - cnv_pipe.batch.run_model - INFO - Cluster 1081 finished in 56.27 seconds. Status: SUCCESS