File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7c/07622b4d6d0d437aec73b3be5cd07d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-t7i8xd0u because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:08:02,724 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:08:03,530 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:08:03,690 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:08:04,545 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:08:04,695 - cnv_pipe.batch.run_model - INFO - Processing cluster 892 with 194 probes
2026-06-04 17:08:05,072 - cnv_pipe.batch.run_model.cluster892 - INFO - Child process started for cluster 892 with 194 probes
2026-06-04 17:08:59,651 - cnv_pipe.batch.run_model.cluster892 - INFO - Child process finished cluster 892. Wrote cluster_892_samples.csv and cluster_892_params.csv
2026-06-04 17:08:59,653 - cnv_pipe.batch.run_model - INFO - Cluster 892 finished in 54.96 seconds. Status: SUCCESS