File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/3aa5e62d60fff84ca5172040881616/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s1x1hr0j because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:06:40,011 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:06:40,873 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:06:41,043 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:06:41,955 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:06:42,114 - cnv_pipe.batch.run_model - INFO - Processing cluster 452 with 169 probes
2026-06-04 17:06:42,484 - cnv_pipe.batch.run_model.cluster452 - INFO - Child process started for cluster 452 with 169 probes
2026-06-04 17:07:32,298 - cnv_pipe.batch.run_model.cluster452 - INFO - Child process finished cluster 452. Wrote cluster_452_samples.csv and cluster_452_params.csv
2026-06-04 17:07:32,299 - cnv_pipe.batch.run_model - INFO - Cluster 452 finished in 50.18 seconds. Status: SUCCESS