mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-y539q_jm because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:06:56,845 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:06:57,699 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:06:57,891 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:06:58,894 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:06:58,965 - cnv_pipe.batch.run_model - INFO - Processing cluster 546 with 151 probes
2026-06-04 17:06:59,458 - cnv_pipe.batch.run_model.cluster546 - INFO - Child process started for cluster 546 with 151 probes
2026-06-04 17:07:46,432 - cnv_pipe.batch.run_model.cluster546 - INFO - Child process finished cluster 546. Wrote cluster_546_samples.csv and cluster_546_params.csv
2026-06-04 17:07:46,433 - cnv_pipe.batch.run_model - INFO - Cluster 546 finished in 47.47 seconds. Status: SUCCESS