File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/50c06677cea925c97cb83d9bcea0f8/.command.err
Size
100.5 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr6_138229684-138229952.bed)
Attempt

Content

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[2026-06-04T17:03:43.355283Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T17:03:43.356499Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T17:03:43.356521Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T17:03:43.356527Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T17:03:43.356532Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXmqhLU3'
[2026-06-04T17:03:43.356536Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T17:03:43.356541Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T17:03:43.356545Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T17:03:43.356549Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] [RunParameters] memMb: 1547931
[2026-06-04T17:03:43.356553Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T17:03:43.356556Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T17:03:43.356560Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T17:03:43.356564Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T17:03:43.356567Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T17:03:43.357358Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T17:03:43.357745Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T17:03:43.363612Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T17:03:43.364246Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T17:03:43.364520Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T17:03:43.364659Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.365226Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.365686Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T17:03:43.365795Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.366232Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.366413Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.368125Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.368281Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.368418Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T17:03:43.368640Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.368726Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.368909Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.369236Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.369356Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.369417Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.369527Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.369589Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.369697Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.369759Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.369866Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.369925Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.370096Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.370160Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.370267Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.370362Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.370711Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.370773Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.370888Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.370950Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.371060Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.371124Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.371229Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.371325Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.371444Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.371506Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.371615Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.371701Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.372369Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.372460Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.372572Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.372631Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.372768Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.372826Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.372939Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.373001Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.373106Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.373165Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.373274Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.373388Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.373622Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.374029Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.374136Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.374197Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.374302Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.374364Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.374468Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.374527Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.374637Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.374705Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.374819Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.374883Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.375004Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.375070Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.375185Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.375266Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.375461Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.376120Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.376244Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.376313Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.376442Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.376518Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.376641Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.376716Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.376841Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.376915Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.378573Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.379072Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.379224Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.379306Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.379432Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.379504Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.379627Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.379695Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.379820Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.379887Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.380008Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.380141Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.380852Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.380923Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.381032Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.381095Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.381204Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.381269Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.381376Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.381436Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.381544Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.381607Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.381717Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.381790Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.382069Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.382812Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.382992Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.383063Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.383175Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.383238Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.383345Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.383409Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.383515Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.383579Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.383706Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.383767Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.385919Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.386591Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.386847Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.386914Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.398730Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.398879Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.398950Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.399139Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.399204Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.399300Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.399368Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.399497Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.399563Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:03:43.399608Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T17:03:43.406712Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.407643Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.408245Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.408822Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.409423Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.409786Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.412424Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.413086Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.413858Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.414118Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T17:03:43.418366Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T17:03:43.421832Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T17:03:43.423886Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T17:03:43.425966Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T17:03:43.428962Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T17:03:43.429638Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T17:03:43.430086Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T17:03:43.530596Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.532008Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.536084Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T17:03:44.399701Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.400938Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.404193Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T17:03:44.565917Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.565994Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.567572Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.567912Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.570943Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T17:03:44.572406Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T17:03:44.631987Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.633725Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.637154Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T17:03:44.747843Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.749568Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.753411Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-04T17:03:44.813927Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.814004Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.815140Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.815630Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.819229Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T17:03:44.821041Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T17:03:44.880223Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.880307Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.881327Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.881600Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.884450Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T17:03:44.885528Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T17:03:44.946053Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.947187Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.950537Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T17:03:45.011822Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.013006Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.015843Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-04T17:03:45.078598Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.078686Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.079721Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.080279Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.083596Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-04T17:03:45.084606Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T17:03:45.113859Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.113921Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.114888Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.115740Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.120178Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T17:03:45.121478Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T17:03:45.831828Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.831951Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.833726Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.834117Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.837600Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T17:03:45.838471Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T17:03:45.998986Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.000718Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.003979Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T17:03:46.065193Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.066373Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.069297Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T17:03:46.130935Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.132071Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.134956Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-04T17:03:46.196466Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.196558Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.197978Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.199841Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.200708Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-04T17:03:46.203087Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T17:03:46.264646Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.264734Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.265781Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.266369Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.269762Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-04T17:03:46.271197Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T17:03:46.332739Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.333813Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.337437Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T17:03:46.549310Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.550497Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.553810Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T17:03:46.614866Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.615933Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.619758Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-04T17:03:46.648318Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.649340Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.652437Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T17:03:46.653340Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.654249Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.657072Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-04T17:03:46.718465Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.719516Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.723051Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T17:03:47.235527Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.236575Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.239707Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-04T17:03:47.300886Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.302025Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.304730Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-04T17:03:47.366218Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.367338Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.370302Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-04T17:03:47.399597Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.400621Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.403878Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-04T17:03:47.432793Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.434113Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.436924Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T17:03:47.498598Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.499627Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.502738Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-04T17:03:47.564127Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.565146Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.568098Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T17:03:47.573118Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.573908Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.576291Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-04T17:03:47.638146Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.638222Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.639112Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.641151Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.643197Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-04T17:03:47.644062Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-04T17:03:47.705349Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.705417Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.706302Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.706815Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.709752Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-04T17:03:47.710805Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-04T17:03:47.739629Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.740690Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.744047Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-04T17:03:47.744600Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.745569Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.748718Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T17:03:47.777657Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.777747Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.778672Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.779220Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.782337Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-04T17:03:47.783963Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T17:03:47.843905Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.843978Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.844005Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.844880Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.845135Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.845370Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.849789Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-04T17:03:47.851275Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T17:03:47.852522Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-04T17:03:47.879530Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.880477Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.883338Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T17:03:47.888447Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.889216Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.891793Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T17:03:47.954398Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.954485Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.954517Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.955331Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.957589Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.959153Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T17:03:47.959677Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.960470Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-04T17:03:47.962865Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T17:03:48.024065Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.024154Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.024190Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.025003Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.025523Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.027915Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.029799Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-04T17:03:48.031954Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-04T17:03:48.033117Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T17:03:48.092886Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.092999Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.094209Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.094917Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.098282Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-04T17:03:48.099626Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T17:03:48.129021Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.129857Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.132838Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-04T17:03:48.194313Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.195286Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.198937Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T17:03:48.227771Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.228598Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.231522Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-04T17:03:48.292800Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.293687Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.296922Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-04T17:03:48.326188Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.327113Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.330003Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-04T17:03:48.391330Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.392266Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.395278Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T17:03:48.958282Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.959077Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.962272Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-04T17:03:48.991200Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.992588Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.993124Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.994347Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.997606Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T17:03:48.998513Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T17:03:49.210883Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.211726Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.214675Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T17:03:49.426442Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.427265Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.430098Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-04T17:03:49.459841Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.460740Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.463467Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T17:03:49.492631Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.493413Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.496292Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-04T17:03:49.525535Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.525632Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.526345Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.526842Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.530326Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-04T17:03:49.531442Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T17:03:49.561259Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.562043Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.564731Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-04T17:03:49.594420Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.595408Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.595921Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.598378Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.599121Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T17:03:49.602195Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T17:03:49.813711Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.813815Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.814533Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.815326Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.817948Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-04T17:03:49.819074Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-04T17:03:49.849876Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.849934Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.850480Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.851002Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.853591Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T17:03:49.855026Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-04T17:03:49.885879Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.886488Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.889656Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T17:03:49.918525Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.919188Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.922171Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T17:03:49.951235Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.951892Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.954776Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-04T17:03:49.967818Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.968384Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.971351Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-04T17:03:49.984443Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.985012Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.988196Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-04T17:03:50.002039Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.002598Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.005139Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T17:03:50.034627Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.035185Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.037812Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-04T17:03:50.099401Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.100026Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.102958Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T17:03:50.164578Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.165529Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.168073Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-04T17:03:50.197662Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.198274Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.200200Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.200670Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-04T17:03:50.200955Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.203397Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-04T17:03:50.232780Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.232843Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.233305Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.234009Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.236772Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-04T17:03:50.238028Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-04T17:03:50.300878Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.300966Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.301519Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.302164Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.304460Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-04T17:03:50.306382Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T17:03:50.335943Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.336438Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.339337Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-04T17:03:50.401766Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.401845Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.402358Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.405001Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-04T17:03:50.434735Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.549088Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.549147Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.549581Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.550090Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.552507Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-04T17:03:50.553485Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-04T17:03:50.583207Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.583265Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.747295Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.747725Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.750559Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-04T17:03:50.779791Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.144385Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.144866Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.147422Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-04T17:03:51.177041Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.177473Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.179488Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.180470Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-04T17:03:51.195314Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.195722Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.198412Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-04T17:03:51.212569Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.228582Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.228867Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.229000Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.229619Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.229950Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.235701Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T17:03:51.235841Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T17:03:51.236685Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T17:03:51.294445Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.294512Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.294539Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.294749Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.295062Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.297643Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T17:03:51.298397Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T17:03:51.327108Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.328345Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.328476Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.330745Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T17:03:51.360435Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:53.928790Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T17:04:02.245161Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T17:04:02.245161Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] 
[2026-06-04T17:04:02.245161Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T17:04:02.245226Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] 
[2026-06-04T17:04:02.245232Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T17:04:02.245240Z] [nf-3650c06677cea925c97cb83d9bcea0f8-59223-2fqwm] [595_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec