File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/bea05ab71a25857f4e139efa2ff542/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-v54i4aah because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:08:49,195 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:08:49,980 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:08:50,144 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:08:51,109 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:08:51,189 - cnv_pipe.batch.run_model - INFO - Processing cluster 1113 with 165 probes
2026-06-04 17:08:51,557 - cnv_pipe.batch.run_model.cluster1113 - INFO - Child process started for cluster 1113 with 165 probes
2026-06-04 17:09:38,634 - cnv_pipe.batch.run_model.cluster1113 - INFO - Child process finished cluster 1113. Wrote cluster_1113_samples.csv and cluster_1113_params.csv
2026-06-04 17:09:38,635 - cnv_pipe.batch.run_model - INFO - Cluster 1113 finished in 47.45 seconds. Status: SUCCESS