Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/b1eed556546aaa8c9c6bf5a4c9ca25/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/2c338fb82705e4e0b4e7a512d35d58/HCC1395_BL.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/2c338fb82705e4e0b4e7a512d35d58/HCC1395_BL.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/b1eed556546aaa8c9c6bf5a4c9ca25/.command.run
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-04T17:03:40.306837Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T17:03:40.308030Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T17:03:40.308054Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T17:03:40.308059Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T17:03:40.308064Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXUrGEHk'
[2026-06-04T17:03:40.308068Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T17:03:40.308072Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T17:03:40.308076Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T17:03:40.308080Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] [RunParameters] memMb: 386708
[2026-06-04T17:03:40.308083Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T17:03:40.308087Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T17:03:40.308090Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T17:03:40.308094Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T17:03:40.308097Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T17:03:40.308826Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T17:03:40.308883Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T17:03:40.314585Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T17:03:40.315208Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T17:03:40.315504Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T17:03:40.315651Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.316114Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.316550Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T17:03:40.318366Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.318545Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.318730Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T17:03:40.319147Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.320120Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.320312Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.320469Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.320544Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.320665Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.320740Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.320857Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.320922Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.321034Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.321104Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.321574Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.321771Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.321886Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.321946Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.322132Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.322200Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.322311Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.322377Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.322486Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.322546Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.322657Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.322721Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.322852Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.322997Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.323433Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.323521Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.323636Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.323697Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.323810Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.323873Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.323983Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.324044Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.324153Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.324216Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.324359Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.324487Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.325023Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.325087Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.325220Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.325284Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.325392Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.325507Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.325622Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.325687Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.325793Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.325856Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.325970Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.326069Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.326543Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.326603Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.326711Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.326775Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.326878Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.326966Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.327073Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.327131Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.327241Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.327302Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.327407Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.327470Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.327669Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.328156Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.328700Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.328767Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.328875Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.328936Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.329046Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.329109Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.330293Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.330467Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.331197Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.331784Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.331901Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.331964Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.332078Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.332141Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.332251Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.332314Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.332427Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.332515Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.332623Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.332693Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.332854Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.333539Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.333655Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.333717Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.333825Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.333887Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.333996Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.334058Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.334170Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.334231Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.349270Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.349915Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.350076Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.350232Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.351130Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.351247Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.351424Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.351653Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.351955Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.352105Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.352600Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.352835Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.353474Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.353731Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:03:40.354388Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.354673Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T17:03:40.355107Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.355950Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.357116Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.360501Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T17:03:40.363787Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-04T17:03:40.366652Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T17:03:40.369614Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T17:03:40.373455Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-04T17:03:40.375579Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-04T17:03:40.376817Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T17:03:40.377853Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-04T17:03:40.441144Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.441662Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.442616Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.443234Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.446495Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.446892Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-04T17:03:40.449523Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T17:03:40.449640Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.452767Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-04T17:03:40.513752Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.514825Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.517798Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-04T17:03:40.930100Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.931177Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:03:40.934171Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-04T17:03:41.195810Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.196842Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.199812Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-04T17:03:41.361257Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.361372Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.362342Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.362827Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.366228Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T17:03:41.416184Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T17:03:41.428403Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.428496Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.429417Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.429986Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.432970Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T17:03:41.434926Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-04T17:03:41.494695Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.495714Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.498732Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-04T17:03:41.527946Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.528965Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.531826Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-04T17:03:41.593332Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.594384Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.597304Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T17:03:41.628109Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.628959Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.631919Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-04T17:03:41.893828Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.894878Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.897906Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-04T17:03:41.927079Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.927971Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:41.930754Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-04T17:03:42.042521Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.043459Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.046289Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-04T17:03:42.107566Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.108550Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.111254Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-04T17:03:42.473807Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.473891Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.474875Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.476566Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.477792Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T17:03:42.480038Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T17:03:42.509547Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.510485Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.513261Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T17:03:42.675298Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.676537Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.679536Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-04T17:03:42.891069Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.892390Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:42.895287Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-04T17:03:43.006601Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.007922Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.010647Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-04T17:03:43.071988Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.072072Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.073248Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.073681Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.077247Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T17:03:43.077841Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-04T17:03:43.138072Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.139282Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.142178Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-04T17:03:43.171305Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.172416Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.175401Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-04T17:03:43.188335Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.189511Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.192303Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T17:03:43.197196Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.198194Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.200811Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T17:03:43.262243Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.262323Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.263617Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.263981Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.267224Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-04T17:03:43.268374Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-04T17:03:43.328072Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.329198Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.332257Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T17:03:43.393523Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.394436Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.397273Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T17:03:43.459149Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.460066Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.462613Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-04T17:03:43.524490Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.525449Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.528035Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T17:03:43.558655Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.559510Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.562199Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-04T17:03:43.575401Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.576171Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.578747Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T17:03:43.593022Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.593806Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.596044Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T17:03:43.609747Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.610519Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.613026Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-04T17:03:43.626829Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.627600Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.630089Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-04T17:03:43.659540Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.660368Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.663120Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-04T17:03:43.774745Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.775665Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.778676Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-04T17:03:43.807913Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.808755Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.811435Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-04T17:03:43.874169Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.875061Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.877981Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T17:03:43.907233Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.908076Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.910903Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-04T17:03:43.940366Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.940477Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.941224Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.941785Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.945022Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-04T17:03:43.945750Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-04T17:03:43.974631Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.975436Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:43.978202Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-04T17:03:44.007618Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.008392Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.011482Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T17:03:44.072806Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.073625Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.076771Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-04T17:03:44.438827Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.439639Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.442631Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T17:03:44.503907Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.504752Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.507412Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T17:03:44.537105Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.537875Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.540691Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-04T17:03:44.571696Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.572417Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.575562Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T17:03:44.604964Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.605807Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.608505Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-04T17:03:44.638944Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.639715Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.642406Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T17:03:44.703931Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.704772Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.707781Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-04T17:03:44.920031Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.920859Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.923925Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-04T17:03:44.937065Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.937808Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.940185Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-04T17:03:44.970982Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.971804Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.975057Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-04T17:03:44.987971Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.988722Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.991556Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-04T17:03:45.004965Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.005933Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.008586Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T17:03:45.021904Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.022807Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.025765Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-04T17:03:45.038939Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.039873Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.042718Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-04T17:03:45.404740Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.405718Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.408918Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-04T17:03:45.570398Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.571452Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.574484Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-04T17:03:45.575175Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.576048Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.578581Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-04T17:03:45.608072Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.608188Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.609011Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.609376Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.612587Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T17:03:45.613767Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-04T17:03:45.673797Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.673910Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.674875Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.675424Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.678768Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T17:03:45.680248Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T17:03:45.707700Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.708544Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.711285Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-04T17:03:45.740506Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.741195Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.743843Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T17:03:45.757139Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.757826Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.760935Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-04T17:03:45.790482Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.791166Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.794080Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T17:03:45.855788Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.856665Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.859780Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-04T17:03:45.889044Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.890120Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.892776Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T17:03:45.955721Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.956375Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.959500Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-04T17:03:46.071192Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.071841Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.075107Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-04T17:03:46.087983Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.088595Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.091671Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T17:03:46.121071Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.121722Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.124459Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-04T17:03:46.154235Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.154351Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.154897Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.157604Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T17:03:46.187701Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.188323Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.191421Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-04T17:03:46.196455Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.228639Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.493522Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.494105Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.496970Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-04T17:03:46.558216Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.590287Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.590818Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.593310Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-04T17:03:46.655442Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.070571Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.071120Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.073941Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-04T17:03:47.135650Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.951717Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.952279Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.954817Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-04T17:03:47.984526Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.008362Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.008939Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.011526Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-04T17:03:52.042214Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.042514Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.042643Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.043224Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.045327Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.046010Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T17:03:52.048603Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T17:03:52.049903Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T17:03:52.078115Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.078187Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.078210Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.078410Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.079039Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.081402Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T17:03:52.082268Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T17:03:52.112304Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.112381Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.112574Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:03:52.114967Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T17:03:52.144814Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:59.263943Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T17:04:13.427394Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T17:04:13.427394Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] 
[2026-06-04T17:04:13.427394Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T17:04:13.427470Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] 
[2026-06-04T17:04:13.427478Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T17:04:13.427485Z] [nf-e9b1eed556546aaa8c9c6bf5a4c9ca25-32a3d-9c5xh] [577_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec