mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xk6ivy_r because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:07:16,971 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:07:17,840 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:07:18,018 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:07:19,000 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:07:19,159 - cnv_pipe.batch.run_model - INFO - Processing cluster 671 with 199 probes
2026-06-04 17:07:19,539 - cnv_pipe.batch.run_model.cluster671 - INFO - Child process started for cluster 671 with 199 probes
2026-06-04 17:08:18,117 - cnv_pipe.batch.run_model.cluster671 - INFO - Child process finished cluster 671. Wrote cluster_671_samples.csv and cluster_671_params.csv
2026-06-04 17:08:18,122 - cnv_pipe.batch.run_model - INFO - Cluster 671 finished in 58.96 seconds. Status: SUCCESS