cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_tissue.md.bam --algo HsMetricAlgo --targets_list targets/altera_v3_targets_coding_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed Sig_18_tissue_altera_v3_targets_coding_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:153000001, elapsed 0.0s, est remaining 0.5s, peak mem 102MB, user 0.1s, sys 0.3s, output queue size 8
progress 10% @chr2:68000001, elapsed 0.0s, est remaining 0.4s, peak mem 102MB, user 0.2s, sys 1.1s, output queue size 21
progress 15% @chr2:229000001, elapsed 0.1s, est remaining 0.4s, peak mem 102MB, user 0.2s, sys 1.6s, output queue size 7
progress 20% @chr3:149000001, elapsed 0.1s, est remaining 0.4s, peak mem 102MB, user 0.3s, sys 2.2s, output queue size 6
progress 25% @chr4:108000001, elapsed 0.1s, est remaining 0.4s, peak mem 102MB, user 0.4s, sys 2.9s, output queue size 7
progress 30% @chr5:80000001, elapsed 0.1s, est remaining 0.3s, peak mem 102MB, user 0.4s, sys 3.5s, output queue size 9
progress 35% @chr6:82000001, elapsed 0.2s, est remaining 0.3s, peak mem 102MB, user 0.5s, sys 4.1s, output queue size 13
progress 40% @chr7:49000001, elapsed 0.2s, est remaining 0.3s, peak mem 102MB, user 0.6s, sys 4.8s, output queue size 17
progress 45% @chr8:45000001, elapsed 0.2s, est remaining 0.3s, peak mem 102MB, user 0.7s, sys 5.4s, output queue size 12
progress 50% @chr9:64000001, elapsed 0.2s, est remaining 0.2s, peak mem 102MB, user 0.7s, sys 6.1s, output queue size 10
progress 55% @chr10:110000001, elapsed 0.3s, est remaining 0.2s, peak mem 102MB, user 0.7s, sys 6.9s, output queue size 19
progress 60% @chr11:109000001, elapsed 0.3s, est remaining 0.2s, peak mem 102MB, user 0.8s, sys 7.5s, output queue size 14
progress 65% @chr13:18000001, elapsed 0.3s, est remaining 0.2s, peak mem 102MB, user 0.9s, sys 8.2s, output queue size 8
progress 70% @chr14:50000001, elapsed 0.3s, est remaining 0.1s, peak mem 102MB, user 0.9s, sys 8.9s, output queue size 11
progress 75% @chr16:24000001, elapsed 0.4s, est remaining 0.1s, peak mem 102MB, user 1.0s, sys 9.4s, output queue size 10
progress 80% @chr17:74000001, elapsed 0.4s, est remaining 0.1s, peak mem 102MB, user 1.0s, sys 10.2s, output queue size 10
progress 85% @chr20:14000001, elapsed 0.4s, est remaining 0.1s, peak mem 102MB, user 1.1s, sys 10.7s, output queue size 17
progress 90% @chrX:41000001, elapsed 0.5s, est remaining 0.1s, peak mem 130MB, user 1.7s, sys 11.1s, output queue size 114
progress 95% @chrY:45000001, elapsed 0.5s, est remaining 0.0s, peak mem 142MB, user 2.1s, sys 11.6s, output queue size 271
progress 100% @chr21:41000001, elapsed 0.9s, est remaining 0.0s, peak mem 157MB, user 3.5s, sys 12.3s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: 1f8bfbff fffab20b
  extended: f1bf07ab 1a407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) Platinum 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50047063
reads: 1001838
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.584 user 6.198 sys 8.020 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.003 user 0.002 sys 0.905 real
idle: 81 calls 0.014 user 0.033 sys 42.123 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 165400576 mem 3.812 user 12.984 sys 2.081 real