File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/cfd300c750f309e7a7b80f528d39e8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d9tp3zpk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:09:00,574 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:09:01,425 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:09:01,593 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:09:02,633 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:09:02,703 - cnv_pipe.batch.run_model - INFO - Processing cluster 1172 with 106 probes
2026-06-04 17:09:03,086 - cnv_pipe.batch.run_model.cluster1172 - INFO - Child process started for cluster 1172 with 106 probes
2026-06-04 17:09:35,835 - cnv_pipe.batch.run_model.cluster1172 - INFO - Child process finished cluster 1172. Wrote cluster_1172_samples.csv and cluster_1172_params.csv
2026-06-04 17:09:35,835 - cnv_pipe.batch.run_model - INFO - Cluster 1172 finished in 33.13 seconds. Status: SUCCESS