File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4b/f8cf42b166fa9b59ebc2f9ae67cf51/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-waa_t2vy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:08:35,081 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:08:35,900 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:08:36,068 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:08:36,969 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:08:37,035 - cnv_pipe.batch.run_model - INFO - Processing cluster 1033 with 200 probes
2026-06-04 17:08:37,488 - cnv_pipe.batch.run_model.cluster1033 - INFO - Child process started for cluster 1033 with 200 probes
2026-06-04 17:09:35,299 - cnv_pipe.batch.run_model.cluster1033 - INFO - Child process finished cluster 1033. Wrote cluster_1033_samples.csv and cluster_1033_params.csv
2026-06-04 17:09:35,300 - cnv_pipe.batch.run_model - INFO - Cluster 1033 finished in 58.27 seconds. Status: SUCCESS