cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_tissue.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed Sig_18_tissue_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:158000001, elapsed 0.0s, est remaining 0.5s, peak mem 115MB, user 0.1s, sys 0.3s, output queue size 4
progress 10% @chr2:67000001, elapsed 0.0s, est remaining 0.4s, peak mem 115MB, user 0.2s, sys 0.9s, output queue size 7
progress 15% @chr2:230000001, elapsed 0.1s, est remaining 0.4s, peak mem 115MB, user 0.2s, sys 1.6s, output queue size 10
progress 20% @chr3:149000001, elapsed 0.1s, est remaining 0.4s, peak mem 115MB, user 0.3s, sys 2.1s, output queue size 6
progress 25% @chr4:133000001, elapsed 0.1s, est remaining 0.4s, peak mem 115MB, user 0.4s, sys 2.8s, output queue size 6
progress 30% @chr5:83000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.5s, sys 3.4s, output queue size 6
progress 35% @chr6:80000001, elapsed 0.2s, est remaining 0.3s, peak mem 115MB, user 0.6s, sys 4.0s, output queue size 5
progress 40% @chr7:72000001, elapsed 0.2s, est remaining 0.3s, peak mem 115MB, user 0.6s, sys 4.6s, output queue size 4
progress 45% @chr8:52000001, elapsed 0.2s, est remaining 0.3s, peak mem 115MB, user 0.7s, sys 5.4s, output queue size 6
progress 50% @chr9:67000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 0.8s, sys 5.9s, output queue size 6
progress 55% @chr10:86000001, elapsed 0.3s, est remaining 0.2s, peak mem 115MB, user 0.9s, sys 6.5s, output queue size 9
progress 60% @chr11:117000001, elapsed 0.3s, est remaining 0.2s, peak mem 115MB, user 1.0s, sys 7.2s, output queue size 6
progress 65% @chr13:36000001, elapsed 0.3s, est remaining 0.2s, peak mem 115MB, user 1.1s, sys 7.7s, output queue size 5
progress 70% @chr14:59000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 1.3s, sys 8.3s, output queue size 15
progress 75% @chr16:9000001, elapsed 0.4s, est remaining 0.1s, peak mem 115MB, user 1.4s, sys 8.9s, output queue size 11
progress 80% @chr17:80000001, elapsed 0.4s, est remaining 0.1s, peak mem 115MB, user 1.5s, sys 9.5s, output queue size 14
progress 85% @chr20:20000001, elapsed 0.4s, est remaining 0.1s, peak mem 115MB, user 1.6s, sys 10.2s, output queue size 16
progress 90% @chrX:41000001, elapsed 0.5s, est remaining 0.1s, peak mem 145MB, user 1.9s, sys 10.6s, output queue size 114
progress 95% @chrY:42000001, elapsed 0.5s, est remaining 0.0s, peak mem 162MB, user 2.5s, sys 11.0s, output queue size 271
progress 100% @chr21:41000001, elapsed 1.0s, est remaining 0.0s, peak mem 175MB, user 4.5s, sys 11.6s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: INTEL(R) XEON(R) PLATINUM 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50047063
reads: 1001838
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.382 user 5.719 sys 7.525 real
done: 1 calls 0.006 user 0.000 sys 0.010 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.003 user 0.001 sys 1.051 real
idle: 74 calls 0.012 user 0.023 sys 46.301 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 184311808 mem 4.952 user 12.320 sys 2.571 real