File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/29/af215ee878805c3f14004110e192c8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0iabe1r2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:07:21,110 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:07:21,956 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:07:22,124 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:07:23,109 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:07:23,180 - cnv_pipe.batch.run_model - INFO - Processing cluster 692 with 182 probes
2026-06-04 17:07:23,650 - cnv_pipe.batch.run_model.cluster692 - INFO - Child process started for cluster 692 with 182 probes
2026-06-04 17:08:18,540 - cnv_pipe.batch.run_model.cluster692 - INFO - Child process finished cluster 692. Wrote cluster_692_samples.csv and cluster_692_params.csv
2026-06-04 17:08:18,542 - cnv_pipe.batch.run_model - INFO - Cluster 692 finished in 55.36 seconds. Status: SUCCESS