File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f9/e781052b677e942aefad1afa3b4121/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vu8m8vtt because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:06:30,933 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:06:31,725 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:06:31,892 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:06:32,743 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:06:32,892 - cnv_pipe.batch.run_model - INFO - Processing cluster 405 with 121 probes
2026-06-04 17:06:33,264 - cnv_pipe.batch.run_model.cluster405 - INFO - Child process started for cluster 405 with 121 probes
2026-06-04 17:07:10,410 - cnv_pipe.batch.run_model.cluster405 - INFO - Child process finished cluster 405. Wrote cluster_405_samples.csv and cluster_405_params.csv
2026-06-04 17:07:10,411 - cnv_pipe.batch.run_model - INFO - Cluster 405 finished in 37.52 seconds. Status: SUCCESS