File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/5fc9a1b5b1f028a199d4d5b804d2c6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5kyuwqjc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:07:18,363 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:07:19,147 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:07:19,302 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:07:20,195 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:07:20,340 - cnv_pipe.batch.run_model - INFO - Processing cluster 680 with 129 probes
2026-06-04 17:07:20,726 - cnv_pipe.batch.run_model.cluster680 - INFO - Child process started for cluster 680 with 129 probes
2026-06-04 17:07:58,818 - cnv_pipe.batch.run_model.cluster680 - INFO - Child process finished cluster 680. Wrote cluster_680_samples.csv and cluster_680_params.csv
2026-06-04 17:07:58,819 - cnv_pipe.batch.run_model - INFO - Cluster 680 finished in 38.48 seconds. Status: SUCCESS