mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xcp3ysf2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:08:15,785 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:08:16,602 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:08:16,766 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:08:17,678 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:08:17,842 - cnv_pipe.batch.run_model - INFO - Processing cluster 936 with 176 probes
2026-06-04 17:08:18,213 - cnv_pipe.batch.run_model.cluster936 - INFO - Child process started for cluster 936 with 176 probes
2026-06-04 17:09:08,720 - cnv_pipe.batch.run_model.cluster936 - INFO - Child process finished cluster 936. Wrote cluster_936_samples.csv and cluster_936_params.csv
2026-06-04 17:09:08,722 - cnv_pipe.batch.run_model - INFO - Cluster 936 finished in 50.88 seconds. Status: SUCCESS