mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9gfyv7og because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:05:38,641 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:05:39,470 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:05:39,639 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:05:40,509 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:05:40,670 - cnv_pipe.batch.run_model - INFO - Processing cluster 113 with 189 probes
2026-06-04 17:05:41,039 - cnv_pipe.batch.run_model.cluster113 - INFO - Child process started for cluster 113 with 189 probes
2026-06-04 17:06:36,356 - cnv_pipe.batch.run_model.cluster113 - INFO - Child process finished cluster 113. Wrote cluster_113_samples.csv and cluster_113_params.csv
2026-06-04 17:06:36,357 - cnv_pipe.batch.run_model - INFO - Cluster 113 finished in 55.69 seconds. Status: SUCCESS