.command.err - Workdir - DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr20_14085521-14085828.bed)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/c504ab3533d561bf29b73d25d9e7f1/.command.err
Size: 87.8 KB
Task: DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr20_14085521-14085828.bed)
Attempt
Content

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX9pOW07/chr20_14085521-14085828.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX9pOW07/chr20_14085521-14085828.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX9pOW07/chr20_14085521-14085828.bed.gz.tbi
[2026-06-04T17:03:44.577962Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-04T17:03:44.579139Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-04T17:03:44.579165Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-04T17:03:44.579170Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-04T17:03:44.579175Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX9pOW07'
[2026-06-04T17:03:44.579179Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-04T17:03:44.579184Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-04T17:03:44.579188Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-04T17:03:44.579192Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] [RunParameters] memMb: 386708
[2026-06-04T17:03:44.579195Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-04T17:03:44.579198Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-04T17:03:44.579202Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-04T17:03:44.579206Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-04T17:03:44.579209Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-04T17:03:44.579962Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-04T17:03:44.580027Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-04T17:03:44.586790Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-04T17:03:44.587668Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-04T17:03:44.587902Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-04T17:03:44.588217Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-04T17:03:44.588386Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.588929Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.589371Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.589913Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.590219Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.592267Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.592545Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.593140Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-04T17:03:44.593382Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.593597Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.593720Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.593788Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.593900Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.593962Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.594090Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.594158Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.594271Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.594363Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.594485Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.594547Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.594922Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.595243Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.595528Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.595593Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.595711Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.595808Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.595925Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.595987Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.596103Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.596175Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.596295Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.596359Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.596502Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.596645Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.596881Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.597192Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.597433Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.597754Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.597869Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.597942Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.598061Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.598126Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.598264Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.598335Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.598457Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.598528Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.598649Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.598718Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.598916Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.598996Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.599489Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.599860Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.599985Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.600055Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.600191Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.600260Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.600389Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.600463Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.600593Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.600667Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.600791Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.600859Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.601228Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.601648Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.601772Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.601849Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.601975Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.602046Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.602654Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.602838Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.603444Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.603529Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.603646Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.603712Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.605087Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.605183Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.605741Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.606557Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.606749Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.606828Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.606949Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.607018Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.607133Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.607196Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.607357Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.607435Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.607706Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.608674Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.608798Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.608862Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.608973Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.609037Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.609152Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.609219Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.609332Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.609392Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.609504Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.609565Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.625188Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.625845Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.626109Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.626298Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.626546Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.627445Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.627500Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.627744Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.628041Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.628370Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.629226Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.629722Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-04T17:03:44.629829Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.630042Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-04T17:03:44.632667Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-04T17:03:44.632921Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.633739Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.634758Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.635804Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.636816Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.639873Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T17:03:44.644343Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-04T17:03:44.647237Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-04T17:03:44.650444Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-04T17:03:44.652310Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-04T17:03:44.653663Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T17:03:44.654996Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-04T17:03:44.718970Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.719067Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.720012Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.720573Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.724594Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-04T17:03:44.725864Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T17:03:44.787661Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.788733Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:44.791544Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T17:03:45.203875Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.204984Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.208122Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-04T17:03:45.520177Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.521287Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.524000Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-04T17:03:45.585582Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.586683Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.589583Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-04T17:03:45.650937Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.651046Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.652028Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.652710Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.655845Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-04T17:03:45.656845Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T17:03:45.717040Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.718162Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.721017Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T17:03:45.782113Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.783080Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.785903Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-04T17:03:45.847244Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.848296Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:45.851906Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-04T17:03:46.114089Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.115106Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.118061Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-04T17:03:46.329873Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.330863Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.333920Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-04T17:03:46.445708Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.446853Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.449564Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-04T17:03:46.561387Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.562388Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.565031Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-04T17:03:46.595461Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.596437Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.599541Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-04T17:03:46.660726Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.660826Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.661747Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.662296Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.665404Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-04T17:03:46.666481Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-04T17:03:46.726926Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.727027Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.727943Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.729589Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.730607Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-04T17:03:46.733026Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T17:03:46.762451Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.763364Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.765991Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-04T17:03:46.795575Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.796879Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.797394Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.799817Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:46.800138Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T17:03:46.802432Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-04T17:03:47.014661Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.015598Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.019023Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T17:03:47.019954Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.020732Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.023403Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-04T17:03:47.053113Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.053909Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.056362Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-04T17:03:47.168184Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.169112Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.171829Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-04T17:03:47.234705Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.235570Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.238489Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T17:03:47.299906Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.301108Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.304482Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-04T17:03:47.365185Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.366241Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.369002Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-04T17:03:47.480507Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.481929Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.484770Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-04T17:03:47.696333Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.697559Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.700276Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-04T17:03:47.729495Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.730649Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.733448Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-04T17:03:47.794690Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.795582Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.798236Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T17:03:47.859860Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.860697Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.863219Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-04T17:03:47.892800Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.893572Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.896285Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T17:03:47.957747Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.957835Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.958580Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.959174Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.961886Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-04T17:03:47.962811Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-04T17:03:47.991313Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.992013Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:47.994417Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-04T17:03:48.056210Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.057008Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.059590Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T17:03:48.121318Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.122132Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.124937Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-04T17:03:48.155257Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.155999Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.158452Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-04T17:03:48.220206Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.220968Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.223706Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-04T17:03:48.485723Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.485817Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.486576Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.487078Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.490637Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-04T17:03:48.521153Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-04T17:03:48.551601Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.551698Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.551723Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.552465Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.553020Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.553656Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.555986Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-04T17:03:48.556725Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-04T17:03:48.559169Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-04T17:03:48.588351Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.588431Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.588462Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.589113Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.589697Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.590318Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.592838Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-04T17:03:48.594748Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-04T17:03:48.596037Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-04T17:03:48.601245Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.601899Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.604357Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-04T17:03:48.634053Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.634134Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.634754Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.635307Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.638110Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-04T17:03:48.665283Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-04T17:03:48.667862Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.668515Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.670901Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-04T17:03:48.833258Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.833984Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.836629Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T17:03:48.898288Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.899018Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.901604Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-04T17:03:48.931162Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.931880Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.934456Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-04T17:03:48.963945Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.964597Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:48.967024Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-04T17:03:49.029871Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.030583Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.033351Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-04T17:03:49.094942Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.095669Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.098550Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-04T17:03:49.460581Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.461298Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.463983Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-04T17:03:49.493565Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.494226Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.496637Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-04T17:03:49.527431Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.528609Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.529860Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.530977Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.531749Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T17:03:49.531845Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.532523Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.535327Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-04T17:03:49.536462Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T17:03:49.565941Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.566589Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.569081Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-04T17:03:49.584149Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.584703Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.587410Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-04T17:03:49.588629Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.589178Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.591848Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T17:03:49.621549Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.622126Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.624971Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-04T17:03:49.654074Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.654153Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.654760Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.656249Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.657154Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-04T17:03:49.658973Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T17:03:49.664557Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.665107Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.667551Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-04T17:03:49.681145Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.681707Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.683888Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-04T17:03:49.685463Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.685976Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.688540Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-04T17:03:49.702157Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.702710Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.705099Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-04T17:03:49.710635Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.711167Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.713073Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.713691Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.713872Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-04T17:03:49.716177Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-04T17:03:49.745590Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.745660Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.745683Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.745707Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.746185Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.746672Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.747260Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.748511Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.751525Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-04T17:03:49.751970Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-04T17:03:49.753049Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-04T17:03:49.754041Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-04T17:03:49.784995Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.785074Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.785098Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.785123Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.785610Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.787279Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:49.788685Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-04T17:03:49.789480Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-04T17:03:49.819396Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.284609Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.285126Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.287633Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-04T17:03:50.349163Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.613627Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.614187Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.616645Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-04T17:03:50.645958Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.860344Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.860885Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-04T17:03:50.863433Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-04T17:03:50.924759Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.389732Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.390268Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-04T17:03:51.392684Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-04T17:03:51.422402Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.288583Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.289208Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.291762Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-04T17:03:57.353435Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.353739Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.353860Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.354086Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.354967Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.357984Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-04T17:03:57.359220Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-04T17:03:57.360225Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-04T17:03:57.387731Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.387794Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.387816Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.387997Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.388402Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.391174Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-04T17:03:57.391992Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-04T17:03:57.420301Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.420362Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.420529Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-04T17:03:57.422626Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-04T17:03:57.452215Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-04T17:04:03.568791Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-04T17:04:17.698633Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-04T17:04:17.698633Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] 
[2026-06-04T17:04:17.698633Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-04T17:04:17.698722Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] 
[2026-06-04T17:04:17.698733Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-04T17:04:17.698742Z] [nf-3bc504ab3533d561bf29b73d25d9e7f1-dc7f8-lg7vl] [581_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec