File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/fe10a080735fc88b2a59f7ec09b3ea/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fanetbe0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:08:48,284 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:08:49,136 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:08:49,306 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:08:50,244 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:08:50,413 - cnv_pipe.batch.run_model - INFO - Processing cluster 1105 with 157 probes
2026-06-04 17:08:50,795 - cnv_pipe.batch.run_model.cluster1105 - INFO - Child process started for cluster 1105 with 157 probes
2026-06-04 17:09:38,969 - cnv_pipe.batch.run_model.cluster1105 - INFO - Child process finished cluster 1105. Wrote cluster_1105_samples.csv and cluster_1105_params.csv
2026-06-04 17:09:38,970 - cnv_pipe.batch.run_model - INFO - Cluster 1105 finished in 48.56 seconds. Status: SUCCESS