mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-itq4iupf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:07:10,360 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:07:11,301 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:07:11,495 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:07:12,676 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:07:12,836 - cnv_pipe.batch.run_model - INFO - Processing cluster 620 with 179 probes
2026-06-04 17:07:13,290 - cnv_pipe.batch.run_model.cluster620 - INFO - Child process started for cluster 620 with 179 probes
2026-06-04 17:08:12,927 - cnv_pipe.batch.run_model.cluster620 - INFO - Child process finished cluster 620. Wrote cluster_620_samples.csv and cluster_620_params.csv
2026-06-04 17:08:12,928 - cnv_pipe.batch.run_model - INFO - Cluster 620 finished in 60.09 seconds. Status: SUCCESS