File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/6250b2475f6059aa0315c73d6353bd/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-y5pdlmiv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:08:33,457 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:08:34,246 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:08:34,418 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:08:35,339 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:08:35,506 - cnv_pipe.batch.run_model - INFO - Processing cluster 1028 with 148 probes
2026-06-04 17:08:35,896 - cnv_pipe.batch.run_model.cluster1028 - INFO - Child process started for cluster 1028 with 148 probes
2026-06-04 17:09:20,765 - cnv_pipe.batch.run_model.cluster1028 - INFO - Child process finished cluster 1028. Wrote cluster_1028_samples.csv and cluster_1028_params.csv
2026-06-04 17:09:20,766 - cnv_pipe.batch.run_model - INFO - Cluster 1028 finished in 45.26 seconds. Status: SUCCESS