File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/2934aee938073a09f9aed10e9d4c99/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2ejeumaw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-04 17:09:09,135 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-04 17:09:09,914 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-04 17:09:10,078 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-04 17:09:10,976 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-04 17:09:11,130 - cnv_pipe.batch.run_model - INFO - Processing cluster 1222 with 99 probes
2026-06-04 17:09:11,503 - cnv_pipe.batch.run_model.cluster1222 - INFO - Child process started for cluster 1222 with 99 probes
2026-06-04 17:09:42,667 - cnv_pipe.batch.run_model.cluster1222 - INFO - Child process finished cluster 1222. Wrote cluster_1222_samples.csv and cluster_1222_params.csv
2026-06-04 17:09:42,667 - cnv_pipe.batch.run_model - INFO - Cluster 1222 finished in 31.54 seconds. Status: SUCCESS